Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0412 ATGAGACACATCACTCTGTGTTATATATTCTTCATTTTCTTCAACTTTCCTCTGTCTACCATTGCTTATAGTAATGACCTCCATGCACTACTCAAGCTCAAAGCCGCCATGAAAACACCCGATGCCAAAGCTTCCGCTCTGGAAGATTGGAAATTCTCTCCACCTCCCTCTGCTCACTGCTCTTTCTCTGGGGTTACCTGCGACCAAGATTTCCGAGTTGTTTCTCTCAACGTTTCCTTCGTTCATCTGTTCGGCTTCCTTCCACCGGAGATTGGCCTCTTGGACAAGCTCGTCAACCTCACCATCTCCCAGAACAATCTCACCGGCGAACTTCCCAAGGAGCTAGCGAACCTGACTTCTCTCAAGGTTTTCAACATCTCCCACAACGTCTTCTCCGGCCATTTTCCTGGAGATATCACTCTTAACATGACTGAGCTTGAGATTCTTGATGCTTACGACAACAACTTCACGGGGCTATTACCAGAAGAGGTTGTGAAATTAAGGAAACTTAGGCATCTTAAGCTTTCCGGGAACTACTTTTCTGGCGAGATTCCGGAGAGTTATTCGGAGTTCGAGAACTTGGAGATTTTGAGCTTGAATGAGAATGGACTCGGAGGTAAAATTCCGGCGACCTTGGCTCGGCTTAATAAGCTTAGAGAATTGTACCTCGGTTACGATAATGTCTATCAAGGAGGGATCCCACCTGAGCTCGGCTTAATGAATATGCTTCAAGTTCTCGACTTGGCTTCTTGTAATCTAACCGGAGAGATTCCGACGAGCTTGAGCGCTTTGAAGAACTTGCGCATTCTGTTACTTCAAATCAATAATCTCACTGGGACTATTCCTCCTGAACTCTCTGGTTTGATTAACCTCAAAACATTGGATCTCTCCATTAACGAATTAACAGGAGAGATTCCTTTAAGTTTCTCATTTCTCAAGAATCTCAGTCTAATCAATCTGTTTCAGAACAAGCTTCACGGCTCCGTTCAGGCGTTCTTTGGGGATCTTCCTGATCTGGAGGTGCTTCAGGTTTGGGAGAACAATTTTTCTTCCGTTTTACCGGAAAACCTTGGAAGCAATGGGAAATTAAAGTTGCTCGATGTTACTAAGAATCATCTTACTGGGTTGGTTCCTAAGGATTTGTGTAAGGGAGGAAGGTTGGAAACTCTGATTCTTATGGATAATGCCTTCTATGGTCCCATTCCGAAAGAGCTGAGTGAGTGTAAGTCTCTGCTGAAGATTCGAATAGCTGATAATTTCTTGAATGAGTCTATTCCATCTGGGATTTTCAAGCTTCCTTCTGTGAGCATAATCGAGCTCAGCAACAACCGATTATCCGGCCAACTTCCGGGGGACATGTCAAGTGATCTTCTTGGGATTCTTACGCTTTCTAACAATTTTTTCACCGGAAAAATTCCTCCGGCGATCGGGAACCTTAAAAGCTTGCAGACTCTGTCACTGGATATGAACCAATTCGTGGGTGAAATTCCAGAGAAAATGTTCATCCTTTCGATGCTGACGAAATTAAACATAAGCTTCAACAACCTTACTGGTCCCATTCCCAATGCCATCACCCGCTGTATTTCTCTCACGGCGGTTGATCTCAGTCGGAATATGCTGGTCGGAGATATCCCAAAGGGAGTTAAGAACATGATCGATCTGAGCATTTTAAATCTCTCAAAGAACCATCTAACCGGGCCGATACCAGATGAAATCCAATTCATGACAAGCCTCACAACCCTCGATCTCTCCGACAATAACCTCACCGGAACAATCCCCACCGGCGGCCAATTTCTTGTCTTCTCCGATAAGTCCTTCGCCGAGTATGCCTACACACTGAAAGTGGACGAGAAAAGCGACGTATATAGCTTTGGGGTGGTATTGTTGGAGCTGATAGTGGGGAAGCAACCAGTGGGAGAGTTCGGAGATGGGGTGTACATCGTGGAGTGGATGAAGAAGACCTCGTCGGAGCTGTCGCCACCAGTGTCGGACGAAGCGGTGGTGCTGGTGGTAGTGGACTGTAGGCTGGATGGGTACTCATTAGAAAGTATCATTCATATGTTCAAGATAGCAATGATGTGCGTGAAAGAAAATGGCACAGCAAGACCCACCATGAGAGAAGTTGTTCAGATGCTTACCAATCTTCCTTAG 2151 0.4542 MRHITLCYIFFIFFNFPLSTIAYSNDLHALLKLKAAMKTPDAKASALEDWKFSPPPSAHCSFSGVTCDQDFRVVSLNVSFVHLFGFLPPEIGLLDKLVNLTISQNNLTGELPKELANLTSLKVFNISHNVFSGHFPGDITLNMTELEILDAYDNNFTGLLPEEVVKLRKLRHLKLSGNYFSGEIPESYSEFENLEILSLNENGLGGKIPATLARLNKLRELYLGYDNVYQGGIPPELGLMNMLQVLDLASCNLTGEIPTSLSALKNLRILLLQINNLTGTIPPELSGLINLKTLDLSINELTGEIPLSFSFLKNLSLINLFQNKLHGSVQAFFGDLPDLEVLQVWENNFSSVLPENLGSNGKLKLLDVTKNHLTGLVPKDLCKGGRLETLILMDNAFYGPIPKELSECKSLLKIRIADNFLNESIPSGIFKLPSVSIIELSNNRLSGQLPGDMSSDLLGILTLSNNFFTGKIPPAIGNLKSLQTLSLDMNQFVGEIPEKMFILSMLTKLNISFNNLTGPIPNAITRCISLTAVDLSRNMLVGDIPKGVKNMIDLSILNLSKNHLTGPIPDEIQFMTSLTTLDLSDNNLTGTIPTGGQFLVFSDKSFAEYAYTLKVDEKSDVYSFGVVLLELIVGKQPVGEFGDGVYIVEWMKKTSSELSPPVSDEAVVLVVVDCRLDGYSLESIIHMFKIAMMCVKENGTARPTMREVVQMLTNLP 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0412 716 Gene3D Transferase(Phosphotransferase) domain 1 608 716 - -
Glsi14g0412 716 Pfam Leucine Rich repeat 504 518 IPR001611 GO:0005515
Glsi14g0412 716 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Glsi14g0412 716 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 227 305 - -
Glsi14g0412 716 Gene3D Ribonuclease Inhibitor 229 332 IPR032675 -
Glsi14g0412 716 Gene3D Ribonuclease Inhibitor 142 228 IPR032675 -
Glsi14g0412 716 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Glsi14g0412 716 SUPERFAMILY Protein kinase-like (PK-like) 608 713 IPR011009 -
Glsi14g0412 716 FunFam Leucine-rich repeat receptor-like protein kinase TDR 309 610 - -
Glsi14g0412 716 Gene3D Ribonuclease Inhibitor 25 141 IPR032675 -
Glsi14g0412 716 Pfam Protein tyrosine and serine/threonine kinase 611 712 IPR001245 GO:0004672|GO:0006468
Glsi14g0412 716 PRINTS Leucine-rich repeat signature 291 304 - -
Glsi14g0412 716 PRINTS Leucine-rich repeat signature 575 588 - -
Glsi14g0412 716 Pfam Leucine Rich Repeat 290 312 IPR001611 GO:0005515
Glsi14g0412 716 Pfam Leucine Rich Repeat 243 264 IPR001611 GO:0005515
Glsi14g0412 716 SMART LRR_typ_2 336 360 IPR003591 -
Glsi14g0412 716 SMART LRR_typ_2 479 503 IPR003591 -
Glsi14g0412 716 SMART LRR_typ_2 191 215 IPR003591 -
Glsi14g0412 716 SMART LRR_typ_2 264 288 IPR003591 -
Glsi14g0412 716 SMART LRR_typ_2 575 598 IPR003591 -
Glsi14g0412 716 SMART LRR_typ_2 432 456 IPR003591 -
Glsi14g0412 716 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 607 707 - -
Glsi14g0412 716 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 141 226 - -
Glsi14g0412 716 SUPERFAMILY L domain-like 333 594 - -
Glsi14g0412 716 SUPERFAMILY RNI-like 75 422 - -
Glsi14g0412 716 Gene3D Ribonuclease Inhibitor 336 607 IPR032675 -
Glsi14g0412 716 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 25 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0412 Glsi-ChrGlsi14 5338885 5342553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0412 608 716 Receptor kinase-like Gene Family AT1G75820 71.560 7.29e-43 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0412 PK_Tyr_Ser-Thr 1.5e-05 CL0016