Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0411 ATGAAGCAGAAGCTAGCAGAGATGAGAATCATCACTCTCTTTTATATATTCTTCATTTTCTTCAACTTTACTCTGTCTACCACTGCTTACGGTAATGACCTCCATGCACTGCTCAAGCTCAAAGCCGCCATGAAAGCATCCAAAGCCACGGCTTCTGCTCTTGAAGATTGGAAATTCTCTCCATCTCCCTCTGCTCACTGCTCTTTCTCTGGGGTCACCTGCGACCAAGATTTCCGAGTTGTTTCTCTGAACGTTTCCTTCGTTCATCTGTTCGGCTTCCTTCCGCCGGAGATTGGTCTATTGGACAAGCTCGTCAACCTCACCATCTCCCAGAACAATCTCACCGGCGAACTTCCCATGGAGCTAGCGAACCTGACTTCTCTCAAGCTTCTCAACGTCTCCCACAACGTCTTCTCCGGCCATTTTCCTGGAGATATCACTCTCAACATGACTGAGCTTGAGATTCTCGATGCTTACGACAACAACTTCACGGGGCTATTACCAGAGGAGGTTGTGAAATTGAGGAAACTTAGGCATCTTAAGCTTTCCGGGAACTACTTTTCTGGCGAGATTCCGGAGAGTTATTCGGAGTTCGAGAACTTGGAGATTTTGAGCTTGAACGAGAATGGACTCGGAGGTAAAATTCCGGCGAGCTTGGCTCGGCTTAAAAAGCTCAGAGAATTGTACCTTGGGTACGATAATGTCTACCAAGGAGGGGTCCCACCTGAGCTCGGGTCAATGAAGACGCTTCAACTTCTTGACTTGGCTTCTTGTAATTTAACCGGAGAGATTCCGCCGAGCTTGAGCGCTTTGAAGAACTTGCACACTCTGTTTCTTCAAATCAATAATCTCACTGGAACGATTCCTCCTGAACTCTCTGGTTTGATTAGCCTCAAATCATTGGATCTCTCCATCAACGAATTAACAGGAGAGATTCCTTCAAGTTTCTCACTTCTCGAGAATCTCACTCTAATCAATCTGTTTCAGAACCAGCTTCGCGGCTCCATTCCGGGGTTCATTGGAGATCTTCCTAATCTAGAAGTGCTTCAGGTTTGGGAGAACAATTTCTCTTTCGTTTTACCTGAAAATCTTGGGAGCAATGGGAAATTAAAGTTGCTCGATGTTACTAAGAATCGTCTTACTGGGTTGGTTCCTAAGGATTTGTGTAAGGGAGGAAGGTTGGAAACTCTGATTCTTATGGATAATGCCTTCTATGGTCCGATTCCGAAGGAGCTGGGTGAGTGTAAGTCTCTTTTGAAGATTCGAATTGCTGATAATTTCCTGAATGAGTCGATTCCTTCTGGGATTTTCAAGCTTCCTTCTGTGAGCATAATCGAACTCGGCAACAACTATTTTTCTGGCGAGTTTCCGGGGGATATATCAAGTGGTCTTCTTGGGATTCTTACGCTTTCTAACAATTTTTTCACCGGAAAAATTCCTCCGGCGATCGGGAACCTTAAAAGCTTGCAGACTCTGTCACTCGATATAAACCAATTCGTGGGTGAAATTCCCGAGAAAATATTTGATCTTCCGATGCTTACAAAATTAAACATAAGCTTCAACAACCTTACTGGTCCCATTCCCAATGACATCACCCACTGTATTTCTCTCACGGCGGTTGATCTCAGTCGGAATATGCTGGTCGGAGATATCCCAGAGGGAATCAAGAACATGATCGATCTGAGCATTTTAAATCTCTCAAAGAACCATCTAACCGGGCCGATCCCAGATGAAATCCGATTCATGACGAGCCTCACAACCCTCGATCTCTCCGACAATAAACTTGCCGGAAGAATCCCCACCGGCGGCCAATTCCTCGTCTTCTCCGACAAATCCTTCGCTGGAAATCCATATCTCTGTTCACCCCACCAGCAAAATTGCAAAACCCACGAGCCCTTTATTTCCAAACCCACCAAACTCATCATCACAATTATCACCCTCGCTACCTTCTTCCTACTTCTTCTCATCACAATCTACACAATGAGAAAAAGGAAGCTTCAGAAATCCATGGCGTGGAAGCTGACGGCGTTCCAGAGGCTAGGCTTCAAAGCAGAGGACGTACTGGAATGTTTAAAAGACGAGAACATAATAGGAAAAGGAGGGGCCGGGATCGTCTACCGCGGGTCCATGGCGGACAACGTCGACGTGGCCATAAAACGACTTGTCGGTCAAGGCAGTGGGCGAAACGACTATGGATTCAAAGCAGAAATCCAGACACTAGGAAGGATAAGGCACAGGAACATAGTGAGGTTGCTAGGGTATGTTTCGAATAAGGACACGAACTTGTTGCTTTATGAGTTTATGCCCAACGGGAGCTTGGGGGAGTGGCTTCATGGGGCGAAGGGAGGGCATTTGCAGTGGGAGGCGAGGTATAGAATTGCAGTGGAAGCAGCTAAGGGACTGTGCTATCTTCACCACGATTGTTCGCCTGCGATTATACATAGGGATGTGAAGTCAAATAATATATTGCTGGATGGTGACTTTGAAGCTCATGTTGCTGATTTTGGGTTGGCCAAGTTCTTGCAGGACCCTGGAGCTTCTCAGTCCATGTCCTCCATTGCTGGCTCCTATGGCTACATAGCACCAGAGTATGCATACACACTGAAAGTGGACGAGAAGACCGATGTGTATAGCTTTGGCGTGGTATTGCTGGAGCTGATAGTGGGGAGGAAGCCGGTGGGCGAGTTCGGAGATGGGGTGGACATCGTGGGGTGGGTGAAGCAGACCACGTCAGAGCTGCCTCAGCCGGTGTCGGAAGCAGCGGCGGTGCTGGCGGTGCTGGACCCCAGGCTGAATAGGTACCCATTACCATTGGGAGGTGTCATTTATATGTTCAAGATAGCGATGAGATGCGTGGAAGAAAAAGGCGAAGACCGACCCACCATGAGGGGAGTTGTTCATATGCTCACCAATCTTCCTCAGTCCACTCCAAACCTAATTCATCTGTAG 2949 0.4724 MKQKLAEMRIITLFYIFFIFFNFTLSTTAYGNDLHALLKLKAAMKASKATASALEDWKFSPSPSAHCSFSGVTCDQDFRVVSLNVSFVHLFGFLPPEIGLLDKLVNLTISQNNLTGELPMELANLTSLKLLNVSHNVFSGHFPGDITLNMTELEILDAYDNNFTGLLPEEVVKLRKLRHLKLSGNYFSGEIPESYSEFENLEILSLNENGLGGKIPASLARLKKLRELYLGYDNVYQGGVPPELGSMKTLQLLDLASCNLTGEIPPSLSALKNLHTLFLQINNLTGTIPPELSGLISLKSLDLSINELTGEIPSSFSLLENLTLINLFQNQLRGSIPGFIGDLPNLEVLQVWENNFSFVLPENLGSNGKLKLLDVTKNRLTGLVPKDLCKGGRLETLILMDNAFYGPIPKELGECKSLLKIRIADNFLNESIPSGIFKLPSVSIIELGNNYFSGEFPGDISSGLLGILTLSNNFFTGKIPPAIGNLKSLQTLSLDINQFVGEIPEKIFDLPMLTKLNISFNNLTGPIPNDITHCISLTAVDLSRNMLVGDIPEGIKNMIDLSILNLSKNHLTGPIPDEIRFMTSLTTLDLSDNKLAGRIPTGGQFLVFSDKSFAGNPYLCSPHQQNCKTHEPFISKPTKLIITIITLATFFLLLLITIYTMRKRKLQKSMAWKLTAFQRLGFKAEDVLECLKDENIIGKGGAGIVYRGSMADNVDVAIKRLVGQGSGRNDYGFKAEIQTLGRIRHRNIVRLLGYVSNKDTNLLLYEFMPNGSLGEWLHGAKGGHLQWEARYRIAVEAAKGLCYLHHDCSPAIIHRDVKSNNILLDGDFEAHVADFGLAKFLQDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKTDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKQTTSELPQPVSEAAAVLAVLDPRLNRYPLPLGGVIYMFKIAMRCVEEKGEDRPTMRGVVHMLTNLPQSTPNLIHL 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0411 982 SMART LRR_typ_2 198 222 IPR003591 -
Glsi14g0411 982 SMART LRR_typ_2 125 149 IPR003591 -
Glsi14g0411 982 SMART LRR_typ_2 486 510 IPR003591 -
Glsi14g0411 982 SMART LRR_typ_2 582 605 IPR003591 -
Glsi14g0411 982 SMART LRR_typ_2 343 367 IPR003591 -
Glsi14g0411 982 SMART LRR_typ_2 271 294 IPR003591 -
Glsi14g0411 982 SMART LRR_typ_2 295 318 IPR003591 -
Glsi14g0411 982 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 347 631 - -
Glsi14g0411 982 SUPERFAMILY Protein kinase-like (PK-like) 682 969 IPR011009 -
Glsi14g0411 982 Gene3D Ribonuclease Inhibitor 339 633 IPR032675 -
Glsi14g0411 982 PRINTS Leucine-rich repeat signature 582 595 - -
Glsi14g0411 982 PRINTS Leucine-rich repeat signature 298 311 - -
Glsi14g0411 982 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Glsi14g0411 982 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Glsi14g0411 982 Pfam Leucine Rich Repeat 513 534 IPR001611 GO:0005515
Glsi14g0411 982 Pfam Leucine Rich Repeat 250 271 IPR001611 GO:0005515
Glsi14g0411 982 Gene3D Transferase(Phosphotransferase) domain 1 768 979 - -
Glsi14g0411 982 Gene3D Ribonuclease Inhibitor 32 147 IPR032675 -
Glsi14g0411 982 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 242 971 - -
Glsi14g0411 982 SUPERFAMILY L domain-like 336 634 - -
Glsi14g0411 982 Pfam Protein tyrosine and serine/threonine kinase 694 969 IPR001245 GO:0004672|GO:0006468
Glsi14g0411 982 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 32 147 - -
Glsi14g0411 982 ProSiteProfiles Protein kinase domain profile. 691 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0411 982 SMART serkin_6 691 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0411 982 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 768 980 - -
Glsi14g0411 982 Gene3D Ribonuclease Inhibitor 148 234 IPR032675 -
Glsi14g0411 982 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 148 234 - -
Glsi14g0411 982 SUPERFAMILY RNI-like 82 405 - -
Glsi14g0411 982 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 660 767 - -
Glsi14g0411 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Glsi14g0411 982 Gene3D Phosphorylase Kinase; domain 1 658 767 - -
Glsi14g0411 982 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 235 340 - -
Glsi14g0411 982 Pfam Leucine rich repeat 536 595 IPR001611 GO:0005515
Glsi14g0411 982 Gene3D Ribonuclease Inhibitor 235 338 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0411 Glsi-ChrGlsi14 5309885 5313443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0411 33 980 Receptor kinase-like Gene Family AT1G75820 65.762 0.0 1261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0411 PK_Tyr_Ser-Thr 2.1e-42 CL0016