Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0340 ATGGAAGACAAAGAAGCCATCCAAGATCATAATTCTCTCCTCTCTAATAATCACAATAATACCATAACCACCATCAAAGAAGAGTCCCAGAAAAAACCCGTTCCCGGTGGTGGTGGTGGTGGTGGTGGAGGCGGCAGTAGTGGTGGTGGCGGTGACAGACTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCTACTCTTCTTGAGGCCTATGAAGCCAAATGGGTGCTTAGAAATAGAGCAAAACTCAAAGGCCATGATTGGGAAGATGTTGCTAGGTACGTTTCATCAAGATCAAACTCCACCAAATCCCCCAAGACACAGACTCAGTGCAAGAATAAGATCGAGTCCATGAAGAAACGGTACCGTTCCGAGTCAGCAACCGCAGATTCCTCTTCTTGGCCTTTGTATTCACGTCTTGATCTTCTGCTACGTGGCACTGGGCCTGCACCATCCACAACACCGGCACAACCACCGGCAACGGCATCTCTGGCTCCGGCACCGTCTCTGGGCAATAACCAGCCTTTGATGTTATTGGAACCCCCTTCGGCGGCGGCTCAGCCTCCTCATCAGCCACCACCTCCGGCTGCTGCTCCTCCACCACAAAACTCACATGGATCCAATGGTGTTGAAAGGTTAGCCAAGGAAGATGGGTTAGGGACCAAGTCATCTGACCATGTGTCTAACAAGAATCCATTAATGGACACCGATAGCAGCACACCGGCCCTTTATAGTACTGAGAAAGAGCAGTTAAGAAGCAACAAGAGGAAGATGAAAATGGAGAACAACAAGAACAACAAGAAGCAGAGGAGTAGGAAAGAAGAGATGGAGATAGCAGAGAGCATAAGGTGGCTGGCAGAAGTGGTGGTGAGGTCAGAACAAGCGAGAATGGACACAATGAAAGAGATAGAGAGGATGAGAGTTGAAGCCGAGGCTAAGAGAGGAGAAATGGATCTCAAAAGAACTGAGATAATTGCCAATACTCAGTTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCATCACTCAAAATTGGTAGAAGTTAA 1062 0.4755 MEDKEAIQDHNSLLSNNHNNTITTIKEESQKKPVPGGGGGGGGGGSSGGGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESATADSSSWPLYSRLDLLLRGTGPAPSTTPAQPPATASLAPAPSLGNNQPLMLLEPPSAAAQPPHQPPPPAAAPPPQNSHGSNGVERLAKEDGLGTKSSDHVSNKNPLMDTDSSTPALYSTEKEQLRSNKRKMKMENNKNNKKQRSRKEEMEIAESIRWLAEVVVRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLKIGRS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0340 353 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 29 339 IPR044823 -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 144 275 - -
Glsi14g0340 353 FunFam Trihelix transcription factor ASIL2 59 124 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 249 275 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 185 201 - -
Glsi14g0340 353 Pfam Myb/SANT-like DNA-binding domain 56 142 IPR044822 -
Glsi14g0340 353 Gene3D - 59 124 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 1 58 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 94 112 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 10 28 - -
Glsi14g0340 353 Coils Coil 248 277 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 224 248 - -
Glsi14g0340 353 MobiDBLite consensus disorder prediction 94 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0340 Glsi-ChrGlsi14 4283079 4285873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0340 33 154 Trihelix Transcription Factor Family AT3G14180 37.302 2.59e-20 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi14g0340 Myb_DNA-bind_4 4e-19 CL0123