Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0314 ATGAAATTTTCTGCCCTTCCGAAACCCATAAACTGATATAACCTGATCTGTAAGATTTCGTCAGAGAAAAAGAAATGGTTGTTCTCAGATTGTAGTGGCATTTGTTGGTTTGGGGTATCGAAGTATTGGATGCTGAAGATGGCTTTACACCATAACGATTCTGATCTCGATGGTGTTTCAGGGCCACCATCTTGCCTTTATGATCTTTTGTGCTCTGAAACTCCAAGTTTGCAATCCCAAAGGGATCGATGGATGTCAACTGGCCCTCTAAAAAGGCTAGAAAAACTGATGCACCAAGCTGGGAACAAGTTCTGCGCTGATTGTGGATCTCCAGAGCCAAAATGGGCATCTTCAAGTCTTGGAGTATTCATTTGCATCAAGTGTTCTGGTATACATAGAAGCCTAGGAGTCCATATATCAAAGGTTCTATCACTGAAACTAGATCAATGGACAGACGAACAAGTTGATGCACTAGTGAAGTTGGGTGGAAATACAGTGCTAAATAAGAAGTACGAAGCTTGCATCCCAAGTAATATAAATAAACCAAAGCCAAATTCTTCCATTGAGGAGCGTACTGAATTTATCAGGAGAAAATATGAGCTGCTACAGTTTGTGGAGTCAGATGAAAGCTTGTCCTGCCCCTTTCCACCACCATCACAGAGCAGTTCATCACGCAGCATTTCTCCTCCAGACAAAAAACAATATAGTAAACAAGCAACCAAAAATCGTATCGGGCAGGCATTTCGTAACAGCTGGGGAAGAAAAGATTCTGACAATAAGGCTGGGAAGAAAAGCAGCTCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATAAAGGTTAATGTGGTTAAAGGCACTAACCTGGCCGTCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTTTCTTTAGGTCACCAGTCGGTAAAGACCCATGTCATAAAGAACAGTCTGAATCCAGTCTGGAATGAGAGCCTAATGCTGTCAATTCCAGAGAACATTCCTCCTCTTAAAGTCCTTGTGTATGACAAAGACACATTCTCAACAGATGATTTCATGGGTGAGGCTGAAATAGACATCCAACCCCTACTCGCAGCCGCGAAGGCCTTTGAGAAATCCACGATCAACGAGTCCATGCAGCTCGGAAAATGGGTAGCAAGCAAGGACAACACCCTTGTTAAAGATGGTATAATCTCCCTGGAAGATGGGAAAATCAGACAGGAAATCTCAGTAAGGCTACAGAATGTTGAGAGAGGGGTGCTGGAAGTTGAGCTTGAGTGTGTTCCTCTCACTCAGTAG 1299 0.4319 MKFSALPKPINXYNLICKISSEKKKWLFSDCSGICWFGVSKYWMLKMALHHNDSDLDGVSGPPSCLYDLLCSETPSLQSQRDRWMSTGPLKRLEKLMHQAGNKFCADCGSPEPKWASSSLGVFICIKCSGIHRSLGVHISKVLSLKLDQWTDEQVDALVKLGGNTVLNKKYEACIPSNINKPKPNSSIEERTEFIRRKYELLQFVESDESLSCPFPPPSQSSSSRSISPPDKKQYSKQATKNRIGQAFRNSWGRKDSDNKAGKKSSSLAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILSLGHQSVKTHVIKNSLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLLAAAKAFEKSTINESMQLGKWVASKDNTLVKDGIISLEDGKIRQEISVRLQNVERGVLEVELECVPLTQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0314 432 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 274 432 - -
Glsi14g0314 432 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 273 367 IPR035892 -
Glsi14g0314 432 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 86 432 IPR044518 GO:0005096|GO:0005543
Glsi14g0314 432 SMART C2_3c 277 372 IPR000008 -
Glsi14g0314 432 CDD C2_ArfGAP 275 419 - -
Glsi14g0314 432 SUPERFAMILY ArfGap/RecO-like zinc finger 91 206 IPR037278 -
Glsi14g0314 432 PRINTS HIV Rev interacting protein signature 142 163 IPR001164 GO:0005096
Glsi14g0314 432 PRINTS HIV Rev interacting protein signature 121 138 IPR001164 GO:0005096
Glsi14g0314 432 PRINTS HIV Rev interacting protein signature 102 121 IPR001164 GO:0005096
Glsi14g0314 432 ProSiteProfiles C2 domain profile. 259 374 IPR000008 -
Glsi14g0314 432 Gene3D C2 domain 275 431 IPR035892 -
Glsi14g0314 432 Pfam C2 domain 277 365 IPR000008 -
Glsi14g0314 432 CDD ArfGap 93 199 - -
Glsi14g0314 432 ProSiteProfiles ARF GTPase-activating proteins domain profile. 90 212 IPR001164 GO:0005096
Glsi14g0314 432 FunFam stromal membrane-associated protein 1 isoform X1 76 210 - -
Glsi14g0314 432 SMART arf_gap_3 87 212 IPR001164 GO:0005096
Glsi14g0314 432 MobiDBLite consensus disorder prediction 213 240 - -
Glsi14g0314 432 MobiDBLite consensus disorder prediction 210 240 - -
Glsi14g0314 432 Gene3D Arf GTPase activating protein 75 212 IPR038508 -
Glsi14g0314 432 Pfam Putative GTPase activating protein for Arf 92 206 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0314 Glsi-ChrGlsi14 3987111 3995169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0314 91 432 C2H2 Transcription Factor Family AT4G21160 48.246 1.05e-119 350