Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0294 ATGATCTTGCAGGGTATGAGAGGGAAAAGTGCATCAGCTAGCATGACACCATCATCATCTTCTTCGAGCTCATCATCACCGTGTGCCGGATGCAAGTTTCTGAGGCGAAAGTGTCAGCCGGAGTGTGTGTTTGCACCTTACTTCCCGCCCCATGATCCCCATAAGTTCGTCAACGTTCACAGGGTGTTCGGAGCAAGCAATGTCACCAAAATTCTTAACGAGGTGCAGCCACACGAGAGAGAAGACGCCGTCAATTCCCTCGCCTACGAGGCCGACATGCGCCTCCGTGACCCAGTCTACGGCTGCGTCGGGGTCATTTCCCTCCTCGTGCACCAGCTCCGGCAGCTCCAAACGGAACTAGCCTTGGCTAAATCCGAGCTCTCCTCCGTCGCCGCCACCCAACCCACACAGAACCTAGAGTTCAGTCTAAGTGGTGGTACTGGCATCCTTAATGACACTTGTTATCGTGATCACCGTCACTATCTTCAACAAGAAGAGGTGTTTAAGAGGATGAATTTTGATGGAAGAAACAACTTCGAGGAAAGTCTATTGGCCACGAACAATATATCTGAAAGCAAAGGGCGTATTTTGAATCCTCGGTTTAAGCAACACAGTGATCATGGCGGTGGCAGCGACGAATTCTACGATCTTATGGATGCAAATATTATAACATCTAATAATCAAAAAGGTATTTATTCGGGTTGGACGGAATCAAAATGGGAGAGAGAAAATCTGACATCTTATTTTGATTAA 753 0.4794 MILQGMRGKSASASMTPSSSSSSSSSPCAGCKFLRRKCQPECVFAPYFPPHDPHKFVNVHRVFGASNVTKILNEVQPHEREDAVNSLAYEADMRLRDPVYGCVGVISLLVHQLRQLQTELALAKSELSSVAATQPTQNLEFSLSGGTGILNDTCYRDHRHYLQQEEVFKRMNFDGRNNFEESLLATNNISESKGRILNPRFKQHSDHGGGSDEFYDLMDANIITSNNQKGIYSGWTESKWERENLTSYFD 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0294 250 MobiDBLite consensus disorder prediction 1 26 - -
Glsi14g0294 250 MobiDBLite consensus disorder prediction 9 26 - -
Glsi14g0294 250 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 151 - -
Glsi14g0294 250 Pfam Lateral organ boundaries (LOB) domain 27 124 IPR004883 -
Glsi14g0294 250 Coils Coil 106 133 - -
Glsi14g0294 250 ProSiteProfiles LOB domain profile. 26 127 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0294 Glsi-ChrGlsi14 3718126 3720276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0294 20 191 AS2 family AT1G65620 60.773 1.34e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi14g0294 LOB 2.8e-41 No_clan