Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0277 ATGAACCCATGTGATTCTCACCCCCGCACTTTCTTGGGACTTCTTCTGCAATCCAGATTCAGCTCTTGCAATCTCGCTGGTGAAGATTCTTCTCGGCTCCTCAATGACTTGGTTACCAGAGAAATCAATGCTTTTCTATGGCTTGCTGTCATCGTCATCACTATTCTTTTGCTCAGAAAAGTCATCAAGCTGTTCGGCTTGTGGTTTAAAGCGAACAAGATTCCTGGGATTCCAAGCCCGTCCTTCTATGGACACTGCAAGCTCATTTCCCGGGAAAATCTCACTGATCTGTTGTCAGAATCTCATGAGAAGTATGGACCAGTTGTTAAGCTATGGTTAGGTCCTACTCAGCTTTTGGTGTCAATTAAGGATCCAACTCTAATTCAAGAGATGCTTGTAAAGGCTCAAGACAAGTTACCTTACACGGGTAAAGCATTTCGTCTAGCCTTTGGGCAATCAAGCCTCTTTGCTTCTTCCTTTGAAAAGGTGCAAAAGAGAAGGGAGTCATTGGCAACAGACTTGAATGAAAGATTGGTCAAGAATGCTAGTCTAATTCCTGAAAAGGTTAAAGACTTCATCATGGATAAAATAGAAAACATGAGAGCCAAAGGAAATATTGATTGTAGATTGGTTTCCCAGCATATGGCTTTCACCATAATGGGAACAACATTCTTTGGAGATGGCTTCTTGGCATGGCCCAAGGCTGCAATTTATGAGGAACTCCTTATGATGATTGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTGACTCCCTTCTGGAGACAAGGATTTTGGAGGTATCAATGCTTATGCACAAAGTTGAAAAGCTTAACTCAAGACATCCTTCAACATTGCAGAAAAAATTGCAAGCTATTTCACCATATTGACCAAAATGTCTACAGTGAAAGGTCAAACATAGAAACGGAGACAGCACATGGTGCACAGTGCTGTCCCGGTGATGACTACCAAGATTACTTTTTCTTTCGGGAGCTTAATGGTCATCATACTGCAAAAGAAGAACCTTATGGGAATATCATGCGAGTGATGTTTCATGGATGTCAAACCACTGCAGCATTAATCTCCAATATATTGACTAGGCTTGTCATGCATTCAGAAATACAGGAAAAGGTTCATTCAGAGATCACCATGGTAGGGAAAAAGCCTTCGAAATATGAGCAGGAAAATGTTTACAGGATGCCTTTATTATTAGCTACTATTTATGAATCTGCACGTCTTCTACCGACTGGGCCCTTTCTGCAGAGGTGTTGTCTGAAACATGACTTGATCCTTGCAACTGGTGTAACCATACCAGCTGGAGCTGTAATGGTTGTGCCTGTTCAATTGGTACAGATGGATGACTCCAGTTGGGGTAGTGATGCAAGTGATTTCAATCCATATCGATTTCTGTCAGATGGTGGAAAGGGATCAGATTTGGTTCTTAATGCTTCATTCACAGGTTCTGCTGAAGGATGTACAAATCTGGGATTCAGATCGTTGAATGATCCAAATAAAAACGCAGCATTTCTTCCTTTTGGATCTGGTACTCGCGCCTGTGTTGGGCAGAAATTTGTCATCCAAGTAGTTGCCACATTATTTGCAACATTACTCAAAGAATACGAGATAAAGCTTCACCCAGCGGGATCAGAAAATGACCTTAAACTGACCTTGAAGAATCATCTTCAGCACCTTCCTAATTCGCCGATAGTGCTGGTTAAACGGGACAACTGA 1731 0.4188 MNPCDSHPRTFLGLLLQSRFSSCNLAGEDSSRLLNDLVTREINAFLWLAVIVITILLLRKVIKLFGLWFKANKIPGIPSPSFYGHCKLISRENLTDLLSESHEKYGPVVKLWLGPTQLLVSIKDPTLIQEMLVKAQDKLPYTGKAFRLAFGQSSLFASSFEKVQKRRESLATDLNERLVKNASLIPEKVKDFIMDKIENMRAKGNIDCRLVSQHMAFTIMGTTFFGDGFLAWPKAAIYEELLMMIAKDACFWASYNVTPFWRQGFWRYQCLCTKLKSLTQDILQHCRKNCKLFHHIDQNVYSERSNIETETAHGAQCCPGDDYQDYFFFRELNGHHTAKEEPYGNIMRVMFHGCQTTAALISNILTRLVMHSEIQEKVHSEITMVGKKPSKYEQENVYRMPLLLATIYESARLLPTGPFLQRCCLKHDLILATGVTIPAGAVMVVPVQLVQMDDSSWGSDASDFNPYRFLSDGGKGSDLVLNASFTGSAEGCTNLGFRSLNDPNKNAAFLPFGSGTRACVGQKFVIQVVATLFATLLKEYEIKLHPAGSENDLKLTLKNHLQHLPNSPIVLVKRDN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0277 576 CDD cytochrome_P450 106 548 - -
Glsi14g0277 576 Pfam Cytochrome P450 81 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
Glsi14g0277 576 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PANTHER CYTOCHROME P450 FAMILY 4 56 548 - -
Glsi14g0277 576 Gene3D Cytochrome P450 69 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 SUPERFAMILY Cytochrome P450 71 574 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0277 576 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0277 Glsi-ChrGlsi14 3568174 3576532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0277 346 541 Cytochrome P450 AT3G61880 29.082 6.69e-19 88.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0277 14 3568174 3576532 Glsi14g0277 14 3568174 3576532 ECH