Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0275 ATGAGGAAGAAGCTTGATACCCGTTTCCCGGCTGCTCGGATTAAAAAGATAATGCAAGCAGATGAGGATGTTGGGAAGATAGCATTAGCAGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGCTATTTTTGCAAGATCTTTGTGATCGTACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTTGATTTTCTGAGGGATGTCGTCAGCAGGGTTCCTGACTATGGTCATGGGCATGGGCATGGGCATGGCCATTCTGAGGCTGGTGCTGATGATCGAGCCCTTTCAAAGAGAAGGAAAGTAGCAAATGATGATTGCAATGACAGCGATGAAGACTCTAAGAGGAGCAAGATGCATGAGTCTGGCCATACTGGCAGTACCGGTAGGGGAAGAGGCCGAGGTAGAGGGAGAGGCCGTGGTCGAGGGGCTCGAAATGTTGAAAGAGAGTCCCATCATCATGAAGTTGAATCTGAGCCTTGCACTTCTGTTCAGCACAGCAGCAAACCTAACCCTAATACAAATGTGGTAATTGATAACGGTTCAGAGCCAAAGGAGTTACCAAAGGAGAATAATGCAGTTCCTGACAAAGGTGCTCAGTCCCTCCGTAACATTGATCTGAATGCCAACTTGAATGAAAATGAGGACAAAAATGCTGGCACAGTAGCTCAAGCCCCTTTGCCTGATCCTGCAACTGAGACTAAGCATGAAGAAATCCCAGGCTGGTCTCTTTCTGATATGGAGAAGATGGCTATTAATTCTATGCAGCTAGCACAATTCGGTAGACAAATAGAAGAGGATGAGGAAGATTATGATGAAGAAGGGTAA 870 0.4448 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHGHSEAGADDRALSKRRKVANDDCNDSDEDSKRSKMHESGHTGSTGRGRGRGRGRGRGRGARNVERESHHHEVESEPCTSVQHSSKPNPNTNVVIDNGSEPKELPKENNAVPDKGAQSLRNIDLNANLNENEDKNAGTVAQAPLPDPATETKHEEIPGWSLSDMEKMAINSMQLAQFGRQIEEDEEDYDEEG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0275 289 MobiDBLite consensus disorder prediction 114 214 - -
Glsi14g0275 289 SUPERFAMILY Histone-fold 4 95 IPR009072 GO:0046982
Glsi14g0275 289 MobiDBLite consensus disorder prediction 228 253 - -
Glsi14g0275 289 FunFam dr1-associated corepressor homolog 1 86 - -
Glsi14g0275 289 MobiDBLite consensus disorder prediction 114 141 - -
Glsi14g0275 289 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 123 - -
Glsi14g0275 289 MobiDBLite consensus disorder prediction 155 174 - -
Glsi14g0275 289 MobiDBLite consensus disorder prediction 175 194 - -
Glsi14g0275 289 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Glsi14g0275 289 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0275 Glsi-ChrGlsi14 3555977 3560685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0275 1 278 CCAAT-HAP5 Transcription Factor Family AT3G12480 52.055 2.09e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Glsi14g0275 CBFD_NFYB_HMF 2.2e-19 CL0012