Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0274 ATGGCACCACATAGTGATGATCAATGTCAGAAGAGTAAGCTTGATTTCATGAAGCTTTCTAATGGCGATCAATCCGTTCATGGATTGAAGGAAGAATTGGATTTTCTCGACTCTGGGAATATTCTAGGCTCGTCTTCTAGGGCAAAAAGTAATAATAATGACAAAAAAGAAGATGATGATGATCAAGATCGCGAGAATATAACGTCGTTGGTGACAAAGACATTCTGCTGCAACTTTTGCAAGAGAGAGTTTTCTTCCTCCCAAGCTTTGGGAGGGCATCAAAACGCTCATAAACAAGAGCGTGCACTGGCAAAACGACGTCAAGGGATGAATATTGTTGATGCTGGAGGTGCTTTAGGGCACCCATACTTTCCTTATTACTATCCTTATTATCCTTATCCAAGCCCTAGTATTTATGGGTCATCCTTCAATTATAGGGCACTAGGGGTTCGGAGGGAATCCATGATTCACAAGCCTTCTTATAATAATCCTTGGGCTGCTGGGTGTTCATCATCATCAAGGTATGCCATGATGAACCAAGAAACCCTGGATAGGAGAAAGGAGGGTTTGCAGGCAGATGGTGCTTCTGGGTTCGGAAGCCCTATTCAGCAATTTGGCCATGATTCTTCCACTTGCGTTGCCATGAACAAGCCAGCTTCAACAACTACTAGAGATCATCAAGTCAAGCCAGAAGAACCTTCCAAAGATGATGATCCAGAATCTTCGGGTCTTGATTTGTCACTTAAGCTTTAA 753 0.4276 MAPHSDDQCQKSKLDFMKLSNGDQSVHGLKEELDFLDSGNILGSSSRAKSNNNDKKEDDDDQDRENITSLVTKTFCCNFCKREFSSSQALGGHQNAHKQERALAKRRQGMNIVDAGGALGHPYFPYYYPYYPYPSPSIYGSSFNYRALGVRRESMIHKPSYNNPWAAGCSSSSRYAMMNQETLDRRKEGLQADGASGFGSPIQQFGHDSSTCVAMNKPASTTTRDHQVKPEEPSKDDDPESSGLDLSLKL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0274 250 MobiDBLite consensus disorder prediction 42 65 - -
Glsi14g0274 250 SUPERFAMILY beta-beta-alpha zinc fingers 73 102 IPR036236 -
Glsi14g0274 250 ProSitePatterns Zinc finger C2H2 type domain signature. 76 97 IPR013087 -
Glsi14g0274 250 Gene3D Classic Zinc Finger 50 114 - -
Glsi14g0274 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Glsi14g0274 250 MobiDBLite consensus disorder prediction 224 244 - -
Glsi14g0274 250 MobiDBLite consensus disorder prediction 50 65 - -
Glsi14g0274 250 Pfam C2H2-type zinc finger 75 99 - -
Glsi14g0274 250 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 250 IPR044246 GO:0009788
Glsi14g0274 250 MobiDBLite consensus disorder prediction 206 223 - -
Glsi14g0274 250 MobiDBLite consensus disorder prediction 206 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0274 Glsi-ChrGlsi14 3549981 3550733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0274 2 250 C2H2 Transcription Factor Family AT5G10970 33.333 5.36e-22 90.1