Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0254 ATGGAAGGAGGGTTTGGCCAAAACTCAGTTCCTTCTTCAGGTTCCTTTGACAAGTCCACGATTTTGGATATTAAACCTATGCGTAGTTTGCTACCAGTGTTTCCAGTGTCATCTCTAGGTCCTTCATCCGGCCAGTGTCCTTCTGGGTTTTCTCCTTTTTTCCCATTTGGTGGACCTCAAGGATCTCAAGCATGGACTGATTTCAATCAGTACACTTCTCCCTCACCAGCTCCAGTACGGTCATTTAGAAGCCCAATAAACACTGGTTCATCAAAACGTGCACCACCACATGTCTCCAAATCATCCCTAAAGAAGACTAAGAAAAATCAAGAGTTACAAATTGATTTAAGTTTTTTGATTGGTATTAGCCTGGCCCAACGAGATGACGGTAACCGGGAAGTGGTTAATCGTGTGCTCATGACATTTGATGCACTTCGAAGAAGGCTCTGCCAACTTGAAGATGCCAAGGAATTGGTTACAGGGTTAACAAAGCGTGCGGATCTAAGATCTGGGAATACTTTGATGAGCAAAGGCATTAGAACAAACATGACAAAGAGAATTGGAGTAGTTCCCGGGGTTGAGATTGGGGACATTTTCTTTTTCCGGATGGAATTATGTGTTGTGGGATTACATGCTCAGTCCATGGGTGGAATTGACTACATGATTATCAGGGGTGAGTTTGAAGATGAACCTGTGGCTTTAAGCATTGTTTCATCGGGAGAATATGATGACAATGCGGAGGATGATAATATTTTAATTTATAGTGGTCAGGGTGGGAACTTCGGCAAGAAAAATAAGCTGGTGGCTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGATAGAAGTTCACGACAACATAATGAAGTAAGAGTCATCCGTGGCATGAAAGATGCTGTCAATCCAAATTCAAAAATATATGTCTATGATGGTCTGTATATAATTCAAGATTCATGGATAGAAAAGGGGAAATCTGGCAGTGGTGTATTTAAGTACAAGTTGGTGAGAATGCCTGGGCAGCTTAGTGCCTTTTCTGTTTGGAAATCGATTCAGAAGTGGAAGGCAGGCTTTCCTTCGAGGGCTGGACTTATTCTTGCAGACCTCTCTTCGGGAGCCGAGAGCATTCCTGTATCACTTGTCAATGATGTTGATTATGAGAAGGTGCCTGCTATTTTCACTTATTTCCATTCCCTTAGATACCCAAAATCATTCAGCTTAATGCAGCCTTCTTATGGCTGCAACTGTACTAAAGCATGTGTTCCTGGTGATTTGAACTGCTCATGTATTCGGAGAAATGATGGTGATTTTCCATATACTGGCAATAGCATTCTAGTGAGTCGAAAGCCAATGGTTCATGAATGTGGCCCCACATGTCAATGTTTTCCTAAATGCAAAAATCGAGTATCTCAGACGGGTTTAAAGCACTCCATGGAAGTATTCAAAACAAAGGATAGAGGATGGGGTCTTCGATCATTGGATCCTATTCGTGCTGGTGCTTTTATTTGTGAGTATGCAGGAGAAGTTATTGACAAAGGCCAGTTAAATCAGAATGGGCAGGAAGGAGATGTTGATGAGTATGATTTTGATACAAGCCGTACCTATGATCCATTCAAGTGGAACTATGAGCCTAGGTTCCTAGAAGAAGTGAGTTCAAATGACTCTGGTGAGGTTTATGCTATTCCTTCTCCTCTAATTATAAGTGCAAAACATTTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCGGTTGTATATGAAGAAAACAATCAATCCTTCCTCCATATTGCATTTTTTGCCCTCAAACACATTCCTCCCATGACAGAGTTGACTTATGATTATGGGATTACCCATTCTAGTTATACTGAGGGTAGCAACATACCACAAGGGAGAAAGAAATGCTTATGTGGCACATCAAAATGCCGTGGTTCTTTTGGTTGA 1962 0.4159 MEGGFGQNSVPSSGSFDKSTILDIKPMRSLLPVFPVSSLGPSSGQCPSGFSPFFPFGGPQGSQAWTDFNQYTSPSPAPVRSFRSPINTGSSKRAPPHVSKSSLKKTKKNQELQIDLSFLIGISLAQRDDGNREVVNRVLMTFDALRRRLCQLEDAKELVTGLTKRADLRSGNTLMSKGIRTNMTKRIGVVPGVEIGDIFFFRMELCVVGLHAQSMGGIDYMIIRGEFEDEPVALSIVSSGEYDDNAEDDNILIYSGQGGNFGKKNKLVADQKLQRGNLALDRSSRQHNEVRVIRGMKDAVNPNSKIYVYDGLYIIQDSWIEKGKSGSGVFKYKLVRMPGQLSAFSVWKSIQKWKAGFPSRAGLILADLSSGAESIPVSLVNDVDYEKVPAIFTYFHSLRYPKSFSLMQPSYGCNCTKACVPGDLNCSCIRRNDGDFPYTGNSILVSRKPMVHECGPTCQCFPKCKNRVSQTGLKHSMEVFKTKDRGWGLRSLDPIRAGAFICEYAGEVIDKGQLNQNGQEGDVDEYDFDTSRTYDPFKWNYEPRFLEEVSSNDSGEVYAIPSPLIISAKHFGNVARFMNHSCSPNVFWQPVVYEENNQSFLHIAFFALKHIPPMTELTYDYGITHSSYTEGSNIPQGRKKCLCGTSKCRGSFG 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0254 653 SMART preset_2 365 459 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi14g0254 653 SMART G9a_1 183 340 IPR003105 -
Glsi14g0254 653 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 79 646 - -
Glsi14g0254 653 MobiDBLite consensus disorder prediction 65 106 - -
Glsi14g0254 653 Gene3D SET domain 358 652 IPR046341 -
Glsi14g0254 653 Pfam SAD/SRA domain 187 340 IPR003105 -
Glsi14g0254 653 ProSiteProfiles Pre-SET domain profile. 411 472 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi14g0254 653 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 653 IPR025794 GO:0016571
Glsi14g0254 653 ProSiteProfiles SET domain profile. 475 622 IPR001214 GO:0005515
Glsi14g0254 653 SUPERFAMILY PUA domain-like 172 358 IPR015947 -
Glsi14g0254 653 MobiDBLite consensus disorder prediction 65 97 - -
Glsi14g0254 653 Gene3D - 171 355 IPR036987 -
Glsi14g0254 653 ProSiteProfiles YDG domain profile. 188 336 IPR003105 -
Glsi14g0254 653 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 171 355 - -
Glsi14g0254 653 Pfam Pre-SET motif 369 467 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi14g0254 653 SUPERFAMILY SET domain 374 650 IPR046341 -
Glsi14g0254 653 ProSiteProfiles Post-SET domain profile. 637 653 IPR003616 -
Glsi14g0254 653 SMART set_7 475 628 IPR001214 GO:0005515
Glsi14g0254 653 Pfam SET domain 486 622 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0254 Glsi-ChrGlsi14 3362309 3364270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0254 1 653 Su(var)3-9 homologs AT1G73100 55.507 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi14g0254 SAD_SRA 1.1e-47 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0254 14 3362309 3364270 Glsi04g1739 04 63692408 63694423 CCT