Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0242 ATGTCTTACTATGGCAAACTCAATGAAGCCGAGCAAGCCCGGCTCGAAGCTCGCCGGAAAACCCGAAAGAGGGTCGCCATCATAACATTGTCATCCATAGTCCTTGTTGGAGTTGTTGTGGCTGCTGTGCTAGGAACTTCTGCTCACAATAATAACAATAAGAATTCTCAATCTCTTTCGGCTTCGGTGAAAGCCGTTTGCGATGTGACATTGCACAAGGATTCTTGCTATAGAAGCCTTGGCCCTCTTGTTCAATCAGGCCAGGTTAAACCAGAGGATTTGTTGAAGCTGTCAATTGAAGTGGCCTTAACTGAAGTGTCCAAAGCCGCTCAGAATTTCTTTGAGAATGGGGTTTTCAAAGATTTGAAGGATAATAAGACCAAGGAAGCTTTGAAAAATTGCAGGGAGCTTCTGGGTCTTGCTGTTGATAATCTGAACAGCTCGTTGTCTTCTGGGGAGAAATCCTCTCTGCTTGAGGTATTTGAAGATCTTGAAACATGGTTGAGTGCTTCAGGTACTTACCAGCAAACATGCATTGATGGCTTTGAGGAGGCAAAAGAAGCTCTTAAGAGCAGTGTTGTAAGCTATCTTAAGAACTCCACAGAGTTCACCAGCAATAGTCTTGCCATCATCACTTGGATCAACAAGGCTGCAAGCACACTGAACTTGAGGCGCTTACTGAGTCTGCCACTTCAGAATGAAGCACCAAGATGGCTGCATAATAATGATAGGAAGAAGCTTCTTCAAACAGGGGATTTGAAGTGGAAAGCTGACATTGTTGTGGCCAAAGATGGCACTGGAAAATACAGAACAATTTCTGCTGCACTTAAACATGTCCCTGATAAAAGCAACAAGAGGATTGTGATCTATGTGAAGAGAGGGGTTTACTATGAGAATGTGAGGGTGGAGAAGACCAAGTGGAATGTCATGATGATTGGTGATGGAATGACAAATACTATTGTCTCTGGCAGCCTTAACTTCATGGATGGCACCCCAACTTTTTCATCTGCAACATTTGCTGTTTTCGGGAACAACTTCATTGCGAGGGACATGGGATTTCGCAACACGGCCGGGCCACAGAAGCACCAAGCAGTGGCACTGATGACAAGTGCAGATCAAGCTGTGTTCTACAGATGCCACATTGATGGCTTCCAGGACACTCTCTATGCTCATGCCCAACGCCAATTCTATAGGGAATGCAACATCTATGGCACAGTTGATTTCATTTTTGGCAATTCTGCAGTTGTCCTCCAAAACTGCAACATTTTGCCAAAAGTGCCTATGCAGGGCCAGCAAAACACAATCACAGCACAAGGCAAAATTGACCCAAACATGAACACTGGAATTTCAATCCAAAATTGCAATATTTCACCCTTTGGGAATTTGAGTTCTGTGAGAACATACCTTGGAAGGCCCTGGAAGAACTACTCAACCACTTTGTATATGCAATCTTCAATGGGAAGCTTCATTGACCCCAATGGTTGGTTACCATGGGTAGGAAACTCAGCACCAGACACAATTTTTTATGCAGAGTTTCAGAATGTTGGACCTGGTGCTTCCACAAAAGATAGGGTGAAATGGAAGGGTCTGAGAACTATTGCTGCTAATCAAGCCAGTAGATATACAGTCAAGGCTTTTCTTCAAGGGGACCGGTGGATTCCAGCATCTGGCGCCCCATATAAGTCCAGTTTGTGA 1695 0.4437 MSYYGKLNEAEQARLEARRKTRKRVAIITLSSIVLVGVVVAAVLGTSAHNNNNKNSQSLSASVKAVCDVTLHKDSCYRSLGPLVQSGQVKPEDLLKLSIEVALTEVSKAAQNFFENGVFKDLKDNKTKEALKNCRELLGLAVDNLNSSLSSGEKSSLLEVFEDLETWLSASGTYQQTCIDGFEEAKEALKSSVVSYLKNSTEFTSNSLAIITWINKAASTLNLRRLLSLPLQNEAPRWLHNNDRKKLLQTGDLKWKADIVVAKDGTGKYRTISAALKHVPDKSNKRIVIYVKRGVYYENVRVEKTKWNVMMIGDGMTNTIVSGSLNFMDGTPTFSSATFAVFGNNFIARDMGFRNTAGPQKHQAVALMTSADQAVFYRCHIDGFQDTLYAHAQRQFYRECNIYGTVDFIFGNSAVVLQNCNILPKVPMQGQQNTITAQGKIDPNMNTGISIQNCNISPFGNLSSVRTYLGRPWKNYSTTLYMQSSMGSFIDPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKDRVKWKGLRTIAANQASRYTVKAFLQGDRWIPASGAPYKSSL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0242 564 PANTHER PECTINESTERASE 34 554 - -
Glsi14g0242 564 CDD PMEI-like_3 65 216 - -
Glsi14g0242 564 FunFam Pectinesterase 252 564 - -
Glsi14g0242 564 Pfam Pectinesterase 258 550 IPR000070 GO:0030599|GO:0042545
Glsi14g0242 564 Gene3D - 253 564 IPR012334 -
Glsi14g0242 564 FunFam Pectinesterase 59 215 - -
Glsi14g0242 564 NCBIfam pectinesterase inhibitor domain 33 214 IPR006501 GO:0004857
Glsi14g0242 564 SMART PMEI_2 58 210 IPR006501 GO:0004857
Glsi14g0242 564 SUPERFAMILY Pectin lyase-like 256 560 IPR011050 -
Glsi14g0242 564 Pfam Plant invertase/pectin methylesterase inhibitor 62 210 IPR006501 GO:0004857
Glsi14g0242 564 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Glsi14g0242 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 215 IPR035513 -
Glsi14g0242 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 214 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0242 Glsi-ChrGlsi14 3089224 3092445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0242 2 564 Carbohydrate Esterase AT3G10710 57.268 0.0 682