Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0241 ATGTCTTCCTTTTCCCTCCTTCCTTTCCTTCTCTCCCTCTTCCTTTTTCTTCCATTACTCCTAGCTCAATCTCAACCTACATCTCCAACCCCACCTTCTCCTTCTTCATCTGCTGCCTGCAAGTTCACATTGTATCCGAAACTCTGCCGTTCGATACTCTCTGTCATCGGCTCCTCGCCGTCGGACCCCTACGGCTTCGGCAAGTTCTCCATCAAACAGTCTCTCAAACAAGCCAAGAAACTCGCCAAGGTGTTTGACGACTTCCTCAAACGCCACCGCTCTTCTTCCCTCCTCAACCGTTCCGAGGTTGCTGCCCTCGATGACTGCAGGGAGCTCAACCAGCTCAACGTCGACTACTTGGAGTCCGTCATGGCTGAGCTGCAATCCTGCGGCTCTGGTGCTACGGATGCCGAGTTCGTGGAGAAGGTTGAGACGTATCTGAGTGCGGTGGCCACCAATCACTACACATGCTATGATGGGTTGGTGGTGACCAAGAGCAACATTGCCAAGGCACTGGCAGTGCCACTGAAGAATGTGACTCAGTTGTACAGCGTCTCGCTTGGGTTGGTCACGGAGGCTCTCAACCAGAGCCTCAAGAAGAATAAGACTCACAAACATGGCCTTCCTACCCAGTCTTACAAAGTCAGGCAGCCTCTTGAGAAGCTCATTAAGGTTCTTCATGAAAAGTATAGCTGCAAGAAATTATCTAATTGCAGTACTAGGAGTGAAAGGATTCTTAAGGAAAGTGAAAGCAGAGGAATTCTATTGAATGACTTTGCAATTGTGAGTCCTTATGGGACAGACAACTTCACTTCAATTGGAGATGCTATAACTGCTGTACCCAATAACTTAAAACCAGAAGATGGCTATTTCCTTATCTATGCAAAACAAGGATACTATGAAGAATATGTCACTGTTCCCAAAAATAAGAAGAATATCTTGCTCATTGGAGATGGTATCAATCAGACTATTATCACAGGGAATCACAGTTACATTGATGGTTGGACAACTTTCAATTCCTCCACCTTTGCTGTTTCTGGGGAAAGATTCATAGCAGTGGATGTAACATTCAGGAACACTGCAGGGCCAGAGAAGCACCAAGCAGTAGCAGTGAGGAACAATGCAGATCTTTCGACATTTTATCGGTGCAGCTTTGAAGGGTATCAAGACACCCTCTATGCTCACTCTTTGAGGCAATTCTATAGAGAATGTGACATCTATGGCACTGTGGATTTCATATTTGGAAATGCAGCTGTGGTCTTCCAGAGCTGCAAGATCTATACCAGGAAGCCATTGCCGTTCCAGAAGAATGCCATCACAGCACAAGGTAGAACTGACCCTAATCAAAACACTGGCATCTCTATCCAAAACTGCACCATTGAAGCTGCACCAGATTTGGCGGCAGAAATAATCAACTCCTCCTCCTACACTACCTTGAACTACTTGGGGAGGCCATGGAAGGAGTATTCTAGGACTGTGTATATGGAATCTTATATTGGAGATCTGATTCAACCTGCTGGTTGGTTAGAGTGGAATGGTACAGTTGGGTTAGACACCCTCTTTTATGGTGAGTTCAACAACCATGGACCTGGGGCTAGTACTAGCAATAGGGTAAAATGGCCTGGTTATAATCTACTTAATGCTACTCAAGCTTGGAACTTTACTGTTCTTAATTTTACACTGGGAGATACATGGCTTCCTGACACAGATATACCATACTCTGCAGGATTACTAAATTTTTAA 1743 0.4538 MSSFSLLPFLLSLFLFLPLLLAQSQPTSPTPPSPSSSAACKFTLYPKLCRSILSVIGSSPSDPYGFGKFSIKQSLKQAKKLAKVFDDFLKRHRSSSLLNRSEVAALDDCRELNQLNVDYLESVMAELQSCGSGATDAEFVEKVETYLSAVATNHYTCYDGLVVTKSNIAKALAVPLKNVTQLYSVSLGLVTEALNQSLKKNKTHKHGLPTQSYKVRQPLEKLIKVLHEKYSCKKLSNCSTRSERILKESESRGILLNDFAIVSPYGTDNFTSIGDAITAVPNNLKPEDGYFLIYAKQGYYEEYVTVPKNKKNILLIGDGINQTIITGNHSYIDGWTTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVFQSCKIYTRKPLPFQKNAITAQGRTDPNQNTGISIQNCTIEAAPDLAAEIINSSSYTTLNYLGRPWKEYSRTVYMESYIGDLIQPAGWLEWNGTVGLDTLFYGEFNNHGPGASTSNRVKWPGYNLLNATQAWNFTVLNFTLGDTWLPDTDIPYSAGLLNF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0241 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 193 IPR035513 -
Glsi14g0241 580 PANTHER PECTINESTERASE 17 567 - -
Glsi14g0241 580 CDD PMEI-like_3 38 192 - -
Glsi14g0241 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 191 IPR035513 -
Glsi14g0241 580 SUPERFAMILY Pectin lyase-like 259 576 IPR011050 -
Glsi14g0241 580 SMART PMEI_2 31 189 IPR006501 GO:0004857
Glsi14g0241 580 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Glsi14g0241 580 Pfam Plant invertase/pectin methylesterase inhibitor 38 188 IPR006501 GO:0004857
Glsi14g0241 580 Pfam Pectinesterase 260 562 IPR000070 GO:0030599|GO:0042545
Glsi14g0241 580 NCBIfam pectinesterase inhibitor domain 9 191 IPR006501 GO:0004857
Glsi14g0241 580 Gene3D - 259 579 IPR012334 -
Glsi14g0241 580 FunFam Pectinesterase 255 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0241 Glsi-ChrGlsi14 3082061 3087810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0241 39 579 Carbohydrate Esterase AT3G10720 61.101 0.0 691