Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0239 ATGGGGATCCACACTATGGGGTCTCAAGGTGGTGGAGATACTAACGGAAAACAGTCACAATTCCAGCCTTTGGTGCGGCAAAACTCAATGTACAGCCTTACACTCGATGAGGTTCAGAATCAGTTAGGTGACTTAGGAAAGCCTCTAAGTAGTATGAACCTTGACGAGCTTCTAAAAAATGTATGGACTGCTGAGGCAAACCAGTCCACGGGCATGGATATCGAAGGCACAGCACAAGCTAGTCAAACTGCTCTGCAGCGTCAGGCTAGTCTATCGTTAACTAGTGCACTAAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAACAAAGCAAAAATAACAAGGAGAAGAAGTATCGGGACAGGCAGCCTACTTTGGGAGAGATGACGTTGGAGGATTTCTTGGTGAAAGCCGGAGTTGTTGCAGAAGCATCTTCTGCTAAAAAAATTACTGGTCCTACAGTTGGGGGTGATTCAAATGTAGCGTCACCTCAGTTTCCTCAGCAAGGTCAGTGGATCCAGTATCCACAAGCACAATATCAGCATCCACAACAAAGTTTAATGGGGATTTATATGCCTAGCCATACTATAGCACAACCATTACACATGGGAGCTGGTTCTGCATTAGATGCTTCTTTTGCAGAAATTCCGGTGGCATTTCCTTCACCTGTGATGGGGACTTTGTCAGATACGCAGACATCTGGAAGAAAAAGAAGCACCCCAGAGGACATGATCGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGAAAACAGGCTTACACACAGGAATTGGAGATTAAAGTCTCACGTTTAGAAGTGGAAAATGAAATCCTGAGGAAACGGAAGGAGCTAGAGAAGATGTTGCCAAGTGCACCAGCTCCTGAACCAAAATATCAGCTCCGGCGAACAACGTCAGCCCCATTCTGA 969 0.4572 MGIHTMGSQGGGDTNGKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEANQSTGMDIEGTAQASQTALQRQASLSLTSALSKKTVDEVWRDIQQSKNNKEKKYRDRQPTLGEMTLEDFLVKAGVVAEASSAKKITGPTVGGDSNVASPQFPQQGQWIQYPQAQYQHPQQSLMGIYMPSHTIAQPLHMGAGSALDASFAEIPVAFPSPVMGTLSDTQTSGRKRSTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEVENEILRKRKELEKMLPSAPAPEPKYQLRRTTSAPF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0239 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Glsi14g0239 322 MobiDBLite consensus disorder prediction 300 322 - -
Glsi14g0239 322 Pfam bZIP transcription factor 252 300 IPR004827 GO:0003700|GO:0006355
Glsi14g0239 322 Coils Coil 275 295 - -
Glsi14g0239 322 CDD bZIP_plant_BZIP46 252 306 - -
Glsi14g0239 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Glsi14g0239 322 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 250 302 - -
Glsi14g0239 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Glsi14g0239 322 MobiDBLite consensus disorder prediction 8 25 - -
Glsi14g0239 322 Gene3D - 250 303 - -
Glsi14g0239 322 MobiDBLite consensus disorder prediction 1 25 - -
Glsi14g0239 322 SMART brlzneu 248 320 IPR004827 GO:0003700|GO:0006355
Glsi14g0239 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 321 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0239 Glsi-ChrGlsi14 3055103 3058234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0239 17 322 bZIP Transcription Factor Family AT3G56850 56.774 4.33e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi14g0239 bZIP_1 2.4e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0239 14 3055103 3058234 Glsi14g0239 14 3055103 3058234 ECH