Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0238 ATGAGATGTCTAATCAACTCGAGGAGGAGACCTACAATCTTCTTCTTTCATGTAATACCAGAGGTAGTATTGAAGATCATCAGGCTGAAAGTTGTTGTTCTTTTCATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAACCAAATACAATTGATAACATATTAGATGGTGAAGAGAAGTTGCATAATGGGGATATAGAAGGCAGAAACATGGTTGATGCTAGTGTTGAGGTACATGCTCTAGATGGTGGAGATTTGAATTCACCCACATTGGATATTACCATATTTAAGGAAGATTCAAATCTTGAGCCCCTTTCTGGTATGGAATTCGAATCTCATGGTGAAGCTTATTCTTTCTACCAAGAATATGCTCGGTCAATGGGATTTAACACTGCAATACAAAATAGTCGTCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAGCGAGAGTATGACAAATCATTCAATCGACCACGCGCAAGGCAGAACAAGCAAGATGCTGAAAATTCAACTGGTCGGAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCTGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAACAAACAAGAAAAATGTATGCTGTGATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAATCCATTTGATAAAGGTCGGAATCTGGGCCTGGAGTCTGGGGATGCCAAACTTCTGCTTGATTATTTTATACAGATGCAAAATATCAATTCGAATTTCTTTTATGCAGTAGATCTTGGTGAGGATCAGCGTCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTCTGTGATGTAGTTTCTTTTGACACCATATATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTATCAATTTATGTTGCTTGGGTGTGCCTTAATATCAGATGAAAGTGCCTCTACTTTTTCTTGGTTAATGTGGACATGGCTGAGAGGAGTTGGTGGCCAGGTTCCAAAAGTGATAATTATTGACCATGACAACACATTGAAGTCAGTTATTTCAGATGTCTTTCCTAATGTGCGTCGTTGTGTGTGCTTATGGCATATATGGGGGAAGGTATCTGAACATTTAGCTCATGTAATTAAACGACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCTTTAGGTCATGGACAAGTGATGAATTTGAGAAGAGGTGGTGGAAAATTGTTGATAGGTTTGAACTCCGAGAAGATCAATGCATGCAGTCATTTTATGAAGATCGTAAGTTATGGGTGCCAACATTCATGGGGGATGTTTTCTTAGGTGGTATGTCTACCGTCCACCGATCTGAAAGTGTGAATTCCTTCTTCGATAAATATGTTCATAAGAAGACCTCTGTGCAAGATTTTGTCAAACTGTATGAAGCAATCTTGCAAGACAGGTATGATGAGGAAGCGAAAGCACATTCAGATACTTGGAATAAAGTGGCTACATTAAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCAGGGAGTTACACACATGCAGTATTCAAGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCCTGTCATCCTAAAGCCGAAAGACAGGGTGCTACAGGTATTACTTACAAGGTTCATGATATGGAAAAGAATCAAGATTTCATAGTTGTGTTGAATGAAATAAAATCAGAGGTGTCTTGCATATGTCGGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTTCTTCAATATTCTGGCCTTTCGGTGATCCCACCTCAATATATTTTGAAACGGTGGACCAGAGATGCGAAGCCCAGGCATTTAATGGGAGAAGAATCTGAACATATGCATGCTAGGGTGCAACGATACAATGATTTATGTCAGCAAGCATTGAAGCTGAGTGAAGAGGGATCTCTGTCTCAAGAGAGTTATAGTATTGCATTCCATGCACTACAGGAAGTATATAAGAATTGTGTAAATGTTAACAATTCTAGTAAGAGTCCTACAGAAATTGGCACATCAGCTGGCCATGGTCAGCTTTCCACTGAAGAAGATACCCAAAGTAAAAATATGGGCAAGATAAACAAAAAGAAGAATCCAACAAAAAAGAAAAAGCTGAACTCTGAGGCTGAAGTGATGACTGTTGGGTCACAAGATAACTTGCAACAAATGGACAAGTTCAGCACAAGAGCCGTAACCCTTGATGGGTATTATGGCACTCAACAAAGTGTGCAGGGAATGTTGAACTTGATGGGACCGACTCGTGATAATTACTATGGGAATCAACAGACTATTCAGGGGCTGGGACAATTAAGTTCCATACCACCAAGTCACGACGGTTATTATGGTGCTCATCAGAGCATGCCTGGTCTGGCACAGCTGGATTTTTTCCGAGCACCAACAGGTTTCACTTATGGCATTCGGGATGATCCTAATGTAAGACCGACCCAATTGCATCAGGATCCATCAAGACATGCATGA 2640 0.3928 MRCLINSRRRPTIFFFHVIPEVVLKIIRLKVVVLFMDIDLRLPSGEHDKEDEEPNTIDNILDGEEKLHNGDIEGRNMVDASVEVHALDGGDLNSPTLDITIFKEDSNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAVMARQFAEYKTVVGLKNEKNPFDKGRNLGLESGDAKLLLDYFIQMQNINSNFFYAVDLGEDQRLKNLLWIDAKSRHDYINFCDVVSFDTIYVRNKYKMPLALFVGVNQHYQFMLLGCALISDESASTFSWLMWTWLRGVGGQVPKVIIIDHDNTLKSVISDVFPNVRRCVCLWHIWGKVSEHLAHVIKRHENFMAKFEKCIFRSWTSDEFEKRWWKIVDRFELREDQCMQSFYEDRKLWVPTFMGDVFLGGMSTVHRSESVNSFFDKYVHKKTSVQDFVKLYEAILQDRYDEEAKAHSDTWNKVATLKTPSPLEKSVAGSYTHAVFKKIQVEVIGAVACHPKAERQGATGITYKVHDMEKNQDFIVVLNEIKSEVSCICRLFEYKGYLCRHALIVLQYSGLSVIPPQYILKRWTRDAKPRHLMGEESEHMHARVQRYNDLCQQALKLSEEGSLSQESYSIAFHALQEVYKNCVNVNNSSKSPTEIGTSAGHGQLSTEEDTQSKNMGKINKKKNPTKKKKLNSEAEVMTVGSQDNLQQMDKFSTRAVTLDGYYGTQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSMPGLAQLDFFRAPTGFTYGIRDDPNVRPTQLHQDPSRHA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0238 879 MobiDBLite consensus disorder prediction 860 879 - -
Glsi14g0238 879 SMART 26again6 614 641 IPR006564 GO:0008270
Glsi14g0238 879 ProSiteProfiles Zinc finger SWIM-type profile. 603 639 IPR007527 GO:0008270
Glsi14g0238 879 Pfam SWIM zinc finger 610 637 IPR007527 GO:0008270
Glsi14g0238 879 MobiDBLite consensus disorder prediction 722 760 - -
Glsi14g0238 879 Pfam FAR1 DNA-binding domain 124 226 IPR004330 -
Glsi14g0238 879 Pfam MULE transposase domain 323 414 IPR018289 -
Glsi14g0238 879 MobiDBLite consensus disorder prediction 722 741 - -
Glsi14g0238 879 MobiDBLite consensus disorder prediction 167 197 - -
Glsi14g0238 879 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 104 713 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0238 Glsi-ChrGlsi14 3042444 3048311 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Glsi14g0238 FAR1 2.2e-27 CL0274