Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0227 ATGAAGAGGTCTTCTTCTTCCGCTGCTTCTTGTTCATCATCACCATCTTCTTCATCTTCTTCTTCCGAAATACAGAATCCTGATAAGAAGCGGCCCAGAAGGAATCCCAAGTCGCAGAAGCAGAAACCCAGTAGCCCAACCCCGAGCTCTGCCAGTGGCGGCAGAAGAAGCTCCATTTACAGAGGAGTCACCAGGCATCGATGGACAGGGAGGTTTGAAGCTCACCTCTGGGATAAGAGCTCCTGGAACAGCCTCCAGAGCAAGAAGGGACGACAAGGGGCTTATGATAATGAAGAAGCTGCTGCCCGTACCTACGATCTTGCTGCCCTGAAATACTGGGGAAGAGATTCGACCTTGAATTTCTCGATTGAGACGTATTCCAAGGAGCTCGAGGAGATGGAAAATGTCACGAAAGAAGAGTACTTGGCTTCGTTGCGACGACAAAGCAATACTCAAGAGGAGGCTGCTGCTGCATATGATTTGGCTGCCATAGAATACAGAGGAACAAATGCAGTGACAAACTTTGACATCAACAACTACATTGACAAAATCAAGAAGAAAACTGAGCAATCCCAGGAAGAACAAACAGTTATCACAATAACAGAAGCAGATCCCAATTCCTCCTCCTTTGAATCATCAGAAGTTGACAATCACATAATTGAACCAACCCCACCAGAAAATCTGCAGAATCAGCACCAGCAGAACCCAGAACAGGAAGAACAAGTTGATCCTGAAGAGCCCCTGTTTCAATCCACCCAGATCCTTCCTCCTAGTGAGGAATCCTCACCAATGGCTGTAATGGACAATTTGTTTGAGCAGGATCTGCCATGGAGCTTCATGGAGGATTATGGGTTCTCTTCATTTGAAATCCCAGACTTTGCTTCTGGGGATTTGCTGAACATGTTTGATGGTTCTTCAGGATTTGAGGACGACATCGATTTTCTGATCAGGCCAGAACCTGAAGAGAGCGATTTCAATCTGAATGCCATTTTGAACAGTCCAAGCTATGAAGATTTAATGGGTGCTGCTGCAACAACAATCATGGTGGGTGAAGATGATGGACCAGAGAAGTTACCGTGCTCTGCAACTTATCCTTCTTCTTCACCATCCTCTTCCATTTCTTCAAACTATACTCTATAA 1140 0.4561 MKRSSSSAASCSSSPSSSSSSSEIQNPDKKRPRRNPKSQKQKPSSPTPSSASGGRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSLQSKKGRQGAYDNEEAAARTYDLAALKYWGRDSTLNFSIETYSKELEEMENVTKEEYLASLRRQSNTQEEAAAAYDLAAIEYRGTNAVTNFDINNYIDKIKKKTEQSQEEQTVITITEADPNSSSFESSEVDNHIIEPTPPENLQNQHQQNPEQEEQVDPEEPLFQSTQILPPSEESSPMAVMDNLFEQDLPWSFMEDYGFSSFEIPDFASGDLLNMFDGSSGFEDDIDFLIRPEPEESDFNLNAILNSPSYEDLMGAAATTIMVGEDDGPEKLPCSATYPSSSPSSSISSNYTL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0227 379 FunFam AP2-like ethylene-responsive transcription factor 58 124 - -
Glsi14g0227 379 SMART rav1_2 136 182 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 SMART rav1_2 59 128 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 PRINTS Ethylene responsive element binding protein signature 158 178 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 MobiDBLite consensus disorder prediction 193 216 - -
Glsi14g0227 379 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 151 232 - -
Glsi14g0227 379 Pfam AP2 domain 59 114 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 SUPERFAMILY DNA-binding domain 150 178 IPR016177 GO:0003677
Glsi14g0227 379 Gene3D AP2/ERF domain 137 178 IPR036955 GO:0003700|GO:0006355
Glsi14g0227 379 Gene3D AP2/ERF domain 59 124 IPR036955 GO:0003700|GO:0006355
Glsi14g0227 379 MobiDBLite consensus disorder prediction 187 247 - -
Glsi14g0227 379 SUPERFAMILY DNA-binding domain 58 123 IPR016177 GO:0003677
Glsi14g0227 379 MobiDBLite consensus disorder prediction 359 379 - -
Glsi14g0227 379 ProSiteProfiles AP2/ERF domain profile. 59 122 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 CDD AP2 59 121 IPR001471 GO:0003700|GO:0006355
Glsi14g0227 379 MobiDBLite consensus disorder prediction 39 57 - -
Glsi14g0227 379 MobiDBLite consensus disorder prediction 1 25 - -
Glsi14g0227 379 MobiDBLite consensus disorder prediction 223 237 - -
Glsi14g0227 379 MobiDBLite consensus disorder prediction 1 62 - -
Glsi14g0227 379 MobiDBLite consensus disorder prediction 361 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0227 Glsi-ChrGlsi14 2948474 2954505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0227 17 180 AP2-EREBP Transcription Factor Family AT5G57390 46.860 1.16e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi14g0227 AP2 2.9e-08 CL0081