Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0223 ATGGACTCGAACAATCCTGCTGGAAATTCTTCACATTTTGATTCTACTCTAAAATCATCTTCTCGTAGAAGTGCTTTGTCAAGTCAGTCCAGGGGATCCGATAGGAATTCGGTTCGGGAAGTGACTTTAAGTCATTCAGGATCGAGACCTGTTAGATATGGGTCAAAGGGCCCTGATTCTGAAGCACTCAGCATGTCGCATAAGGAAATCAGCGACGAGGATGCGAGATTGGTTTATATAAATGATCCTTTGAAGACAAATGAGAGGTTTGAATTCGCTGGAAATTCTATTCGTACGGGGAAATACTCCATCCTCACCTTTTTGCCCAGGAATTTGTATGAACAATTCCATAGAGTTGCTTATATTTATTTCCTTATAATTGCCGTTCTTAATCAGCTCCCTCAGCTTGCTGTTTTTGGTAGGGGAGTTTCCATTTTGCCTTTAGCCTTTGTTCTGCTTGTAACAGCTGTGAAAGATGCATTTGAGGACTGGAGGAGGCATCGTTCAGACAAAGTTGAGAACAACAGGTTAGCAACGGTTTTAGTTAATGGTCAGTTCCAACAGCAGATATGGAAGGATATTAGAGTTGGTGAAATTGTTAAAGTCCATGCAAATGAGACCCTTCCTTGTGATATTGTCTTGCTGTCAACTAGTGATCCTACTGGAGTTGCATATGTGCAGACTATTAATTTAGATGGAGAATCAAATTTGAAGACACGGTATGCAAAACAAGAGACCCTTTCAAAGTTGCCTGAAAAGGAGAGAATTAATGGTTTGATTAAGTGTGAGAAACCCAATAGAAACATATATGGGTTTCAGGCTAACATGGAAATTGATGGAAAGCGGTTGTCACTTGGATCCTCCAATATTGCTCTTCGAGGCTGTGAGCTCAAGAACACTCGCTGGGCCCTTGGTGTTGCTGTATATTGTGGCAGTGAGACCAAAGTTATGCTCAACAGCTCAGGAGCTCCATCTAAGAGAAGCCGGCTAGAGACTCGCATGAACTATGAGATAATCATTCTCTCTTTCTTTCTTGTTGCTTTGTGTACAGTTACCTCTGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGCTAAATCTCTTGCCCTATTATAGGAAACTGGATGTTTCCAAGGGAGGAGAGGATAGCTACAAATATTATGGATGGGGGTTGGAAATTTTTTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATCCCCATCGCCTTGTACATTTCCATGGAGCTTGTCCGGGTTGGTCAGGCCTACTTAATGATCCGAGATAACAGAATGTATGATGAGGCATCAAATACCAGATTTCAGTGCAGGGCTTTAAACATTAATGAAGATTTAGGGCAAATTAAATACGTTTTCTCAGACAAAACTGGTACACTTACTGAGAACAAGATGGAGTTTCAATGTGCGAGCATCTATGGGGTTGATTACAGTTCCGCAAAAGCCAGTGTGGAGAATGAGCAAGTTGAATACTCTGTTGAAGTGGATGGAACATTGATGAGGCCAAAGATGAAGGTGAAAGTTGATCCTGAACTTTTGCTATTAGCAAAAGGTGGACTTGAAAATAAGGAGGGGAAACAGATTCGTGATTTCTTCCTAGCATTAGCAGCCTGCAATACCATTGTACCTCTTGTTGTTGACACATCTGATCCTAAAGTCAAATTGATAGATTACCAAGGGGAGTCACCAGATGAACAAGCACTGGCATATGCTGCTGCCGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGCCACATAGTTATTGATATCCAGGGAGAGAGACAAAGGTTCAATGTCTTGGGCTTGCATGAATTTGATAGTGATCGGAAGAGAATGTCAGTTATATTGGGGTACCCTGACAGTTCTGTGAAAGTTTTTGTTAAGGGTGCAGATACAACCATGCTTACTGTAGTTGATAAATCATTGAACATAGACATAATACGTGCAACCGAAAGCCATCTTCACTCTTATTCCTCGTTGGGGTTGAGGACACTTGTCATTGGGATGAGGGACTTGAATGCTGCAGAATTTGAGCAATGGCATTTTGCCTTTGAGACAGCAAGCACTGCTTTGCTTGGTCGGGCTGCTTTGCTTCGTAAGGTTGCTAGCAGTATAGAAAACAACCTCTGCATATTGGGTGCATCTGGTATTGAAGATAAACTGCAGAAAGGGGTGCCAGAATCCATAGAATCTCTAAGGACAGCAGGGATTAAGGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAGCTCCTAACAAGAAGCATGACTCAGATTATAATAAATAGCAACAATAGAGAGTCGTGTAGAAGGAGATTACAAGATGCCCTTGTCATGTCTAACAAACTCATGACTGTGTCTGGGGTTAACAATAGTACTGGACCAAGTTCTGATGCTGTTCCAACTCCAATAGCCTTGATCATTGATGGTACCAGCCTTGTATATATTCTTGACGGTGAACTTGAAGAACAGCTCTTTCAATTGGCAAGTAAATGTTCTGTGGTTCTCTGTTGTCGAGTGGCACCATTGCAAAAGGCTGGGATTGTTGCCCTTGTGAAGAGCAGGACGTCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGGCAGTTTAGGTTCTTAGTTACTCTCTTATTGGTGCATGGGCACTGGAATTACCAGCGGCTGGGTTACATGATACTATACAATTTTTACAGAAACGCCATCCTTGTTCTTGTCTTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACGACAGCTATAAACGAATGGAGCACGATGTTGTATTCAATAATCTACACTTCATTACCAACTATAGTTGTTGGTATACTCGACAAGGATCTTAGTAGAAGGACTCTTTTGAATTATCCTCAGCTTTATGGAGCTGGACAGAGACAAGAGGCCTACAACAAAAAATTATTTTGGTGGACAGTGGTTGATACTTTGTGGCAAAGCATTACGGTCTTCTTTGGTCCTTTCTTTGCATATTGGGGAAGTACAGTTGATGTATCAAGCATAGGAGATCTCTGGACTCTCGCAGTCGTTATTTTGGTTAATTTACACCTCGCCATGGATGTCAGCAGGTGGTATTGGGTTACTCATGCCGCCATTTGGGGGTCCATTGTTGCAACTTTCATTTGTGTCATGATCATTGATGCTATACCTGCATTTCCTGGTTACTGGGCCTTCTTTCACACAGCAGACTCTGGATTGTTTTGGTTATGTTTACTCGGAATCATCATTGCAGCATTGCTTCCTCGATTGGTCGTGAAGTTTATTTATCAATATTACTGTCCTGATGATATCCAAATTTCGAGAGAAGGCGAGAAGTTTGAGAATTCAAGAGTGGTTGGAGGTGGACAGATAGAAATGCATCCCATTCCAGATGTTTACATATTCTTTAGGCCACTTCAGAGATCTTCTGTTGGTTGCCGCGGGATTTCATCCTCTGCTGTCCGAAGGATGAGTGCAGTTCTGGCTCTATGCATTCTTGGTATTTGTAAAATGAGATTGGCCAGCCAGCAGACTGTCTGTACTCTACGGGTTATCCTACTGGACTGTGGACACTTCAATTTCATCTTCTATTCTATTAAGGCCATATTGGAGATGAGACAAATGCTTCGGGTTACAACAAAGAGATCATTCTGA 3795 0.4221 MDSNNPAGNSSHFDSTLKSSSRRSALSSQSRGSDRNSVREVTLSHSGSRPVRYGSKGPDSEALSMSHKEISDEDARLVYINDPLKTNERFEFAGNSIRTGKYSILTFLPRNLYEQFHRVAYIYFLIIAVLNQLPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKVENNRLATVLVNGQFQQQIWKDIRVGEIVKVHANETLPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKLPEKERINGLIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIALRGCELKNTRWALGVAVYCGSETKVMLNSSGAPSKRSRLETRMNYEIIILSFFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDVSKGGEDSYKYYGWGLEIFFTFLMSVIVFQVMIPIALYISMELVRVGQAYLMIRDNRMYDEASNTRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIYGVDYSSAKASVENEQVEYSVEVDGTLMRPKMKVKVDPELLLLAKGGLENKEGKQIRDFFLALAACNTIVPLVVDTSDPKVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIQGERQRFNVLGLHEFDSDRKRMSVILGYPDSSVKVFVKGADTTMLTVVDKSLNIDIIRATESHLHSYSSLGLRTLVIGMRDLNAAEFEQWHFAFETASTALLGRAALLRKVASSIENNLCILGASGIEDKLQKGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTRSMTQIIINSNNRESCRRRLQDALVMSNKLMTVSGVNNSTGPSSDAVPTPIALIIDGTSLVYILDGELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKSRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVTLLLVHGHWNYQRLGYMILYNFYRNAILVLVLFWYVLFTAFTLTTAINEWSTMLYSIIYTSLPTIVVGILDKDLSRRTLLNYPQLYGAGQRQEAYNKKLFWWTVVDTLWQSITVFFGPFFAYWGSTVDVSSIGDLWTLAVVILVNLHLAMDVSRWYWVTHAAIWGSIVATFICVMIIDAIPAFPGYWAFFHTADSGLFWLCLLGIIIAALLPRLVVKFIYQYYCPDDIQISREGEKFENSRVVGGGQIEMHPIPDVYIFFRPLQRSSVGCRGISSSAVRRMSAVLALCILGICKMRLASQQTVCTLRVILLDCGHFNFIFYSIKAILEMRQMLRVTTKRSF 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0223 1264 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Glsi14g0223 1264 CDD P-type_ATPase_APLT_Dnf-like 94 1041 - -
Glsi14g0223 1264 NCBIfam HAD-IC family P-type ATPase 394 484 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0223 1264 NCBIfam HAD-IC family P-type ATPase 852 967 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0223 1264 SUPERFAMILY Calcium ATPase, transduction domain A 175 317 IPR008250 -
Glsi14g0223 1264 SFLD p-type atpase 446 932 IPR044492 -
Glsi14g0223 1264 MobiDBLite consensus disorder prediction 1 44 - -
Glsi14g0223 1264 FunFam Phospholipid-transporting ATPase 566 699 - -
Glsi14g0223 1264 SUPERFAMILY HAD-like 449 923 IPR036412 -
Glsi14g0223 1264 NCBIfam phospholipid-translocating P-type ATPase 92 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi14g0223 1264 Pfam Phospholipid-translocating ATPase N-terminal 78 143 IPR032631 -
Glsi14g0223 1264 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1148 IPR032630 -
Glsi14g0223 1264 Pfam Cation transport ATPase (P-type) 570 645 - -
Glsi14g0223 1264 Pfam E1-E2 ATPase 177 420 - -
Glsi14g0223 1264 SFLD C1.7: P-type atpase like 446 932 - -
Glsi14g0223 1264 Gene3D - 718 921 IPR023214 -
Glsi14g0223 1264 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Glsi14g0223 1264 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Glsi14g0223 1264 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 68 1161 - -
Glsi14g0223 1264 FunFam Phospholipid-transporting ATPase 718 921 - -
Glsi14g0223 1264 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 468 735 IPR023299 GO:0000166
Glsi14g0223 1264 SUPERFAMILY Calcium ATPase, transmembrane domain M 92 1148 IPR023298 -
Glsi14g0223 1264 Gene3D - 151 319 - -
Glsi14g0223 1264 Gene3D - 565 697 IPR023299 GO:0000166
Glsi14g0223 1264 FunFam Phospholipid-transporting ATPase 150 319 - -
Glsi14g0223 1264 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0223 Glsi-ChrGlsi14 2870014 2877642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0223 1 1178 Primary Pumps ATPases AT5G04930 69.120 0.0 1717