Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0208 ATGATGGCAAAAGCAAGAAATCAGCTAACTTGTAGGTTGGATAGAGAAATAAGAGCAGCAGGGAAAGACGTGAGGAACCTGAAAGAAAACCCTAGCGCCATCGTTTGTCCCATATTAGTGTTTCTTCTTACTCTCCCCTCCTTTGCCTCTGCCGCTGCAAAACTTCGCTCAGACCCCATTCCAATGGCTTCAGAGAAGAAATTGTCGAACCCCATGAGGGAAATCAAGGTCCAGAAGCTTGTTCTCAACATCTCCGTCGGGGAGAGTGGAGATCGTCTCACCAGAGCTGCCAAGGTGCTGGAGCAGCTTAGTGGCCAAACCCCAGTGTTCTCCAAAGCGCGATACACTGTTCGTTCCTTTGGTATTAGAAGAAATGAAAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTCTGAAGGTGAAGGAATATGAACTTCTGAGAAGAAACTTCAGTGATACTGGGTGTTTTGGCTTCGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCATCAACTGGTATCTATGGAATGGACTTCTTTGTTGTTCTGGAGCGCCCTGGTTATCGTGTGGGACGTCGCCGTAGGTGCAAGTCTCGTGTTGGGATCCAGCACCGTGTCACAAAGGAGGACGCCATGAAATGGTTCCAGGTGAAATACGAAGGAGTGATCCTTAACAAGTCCCAGAATATCATTGGTTAG 732 0.4699 MMAKARNQLTCRLDREIRAAGKDVRNLKENPSAIVCPILVFLLTLPSFASAAAKLRSDPIPMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIIG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0208 243 Gene3D - 62 238 IPR022803 -
Glsi14g0208 243 ProSitePatterns Ribosomal protein L5 signature. 100 116 IPR020929 GO:0003735|GO:0005840|GO:0006412
Glsi14g0208 243 Pfam Ribosomal protein L5 70 123 IPR031310 -
Glsi14g0208 243 Pfam ribosomal L5P family C-terminus 127 225 IPR031309 -
Glsi14g0208 243 SUPERFAMILY RL5-like 69 234 IPR022803 -
Glsi14g0208 243 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 55 237 IPR002132 GO:0003735|GO:0005840|GO:0006412
Glsi14g0208 243 FunFam 60S ribosomal protein L11 63 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0208 Glsi-ChrGlsi14 2734540 2740656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0208 62 243 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 95.604 1.60e-130 364