Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0204 ATGTTCTTCTCCTTGTCCTGTCTTTGCAGAATGGATATTGTTTTCCAGGAAAAGCCCCTTTTGAGAAAAAACGATCAAAATTTTCAGCTAAAGAAGATGGCCCACATACTGATTTTTGTTCTTGGACTAGCTTTAGCTGCATTTTTGGCGATTCTTCTACTTTATTTCTTCTTTTACCGCAAAAGGATAAGAACCCATGAGAGTGAAGACATAGAAAGCTCAGGACACAAACATGAAGATATAGTGCAGAAAGAGGACTTGGTAATCTTCCAAGGCGGAGAGAACCTCACGATTTGCGACATTCTTGATGCTCCTGGAGAAGTAATAGGAAAATCCAATTATGGGACTCTGTATAAGGCTTTATTGCAGCGGTGCAACGCAGTGAGGCTTCTGAGGTTTTTGAGACCAGTGTGCACTACAACAGCTGAAGAACTGGTTGATATGACTAGGATGCTTGGAGATATAAGGCACCCCAATTTGGTTCCTCTTCTGGGATTTTACACAGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCTTTTTATGCTCATGGGAATCTAACCCAATTCATAAGAGATGGAAATGGTGAGTGTTATAAATGGGCAACAATATATCGAATATCGTTCAGTATAGCCAAGGGATTAGAACATCTTCACACAGGACTGGAGAAGCCTATGATCCATGGGAATCTGAAGTCGAAAAACATCCTTTTAGATCGCAATTACCAGCCATACATCTCGGATTTTGGCCTGCATCTTCTGCTGAATCCCACTGCTGGCCAAGAAATGCTTGAGGCTTCAGCAGCTCAAGGTTACAAGGCACCTGAAATGATCAAAATGAAGGATGCTAGTGAAGAGACTGATATATATAGCCTTGGTGTGATCTTGCTAGAGTTACTTTCGAGGAAGGAGCCTATCAACGAACATCCAACCCCCGATGAGGATTTCTATTTGCCAAATTTCATGCGAACTGCAGTCCTTGGACATAGAATTGCTGATTTATACCATCCTGCCATTCTTCTCAGCAGTAGCCGAGATGATGGAGCCCCAGTTCGAGAAGAATGCATTCTCAAGTTCTTTCAACTTGCTATGTCTTGTTGTTCCCCTTCACCTTCTCTTAGACCAAACATAAAGCAAGTCCTTTGGAAGCTTGAAGAAATTATCAAATAA 1167 0.4199 MFFSLSCLCRMDIVFQEKPLLRKNDQNFQLKKMAHILIFVLGLALAAFLAILLLYFFFYRKRIRTHESEDIESSGHKHEDIVQKEDLVIFQGGENLTICDILDAPGEVIGKSNYGTLYKALLQRCNAVRLLRFLRPVCTTTAEELVDMTRMLGDIRHPNLVPLLGFYTGPRGEKLLVHPFYAHGNLTQFIRDGNGECYKWATIYRISFSIAKGLEHLHTGLEKPMIHGNLKSKNILLDRNYQPYISDFGLHLLLNPTAGQEMLEASAAQGYKAPEMIKMKDASEETDIYSLGVILLELLSRKEPINEHPTPDEDFYLPNFMRTAVLGHRIADLYHPAILLSSSRDDGAPVREECILKFFQLAMSCCSPSPSLRPNIKQVLWKLEEIIK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0204 388 Gene3D Phosphorylase Kinase; domain 1 104 180 - -
Glsi14g0204 388 Pfam Protein tyrosine and serine/threonine kinase 107 381 IPR001245 GO:0004672|GO:0006468
Glsi14g0204 388 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0204 388 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 49 386 - -
Glsi14g0204 388 SUPERFAMILY Protein kinase-like (PK-like) 106 385 IPR011009 -
Glsi14g0204 388 Gene3D Transferase(Phosphotransferase) domain 1 182 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0204 Glsi-ChrGlsi14 2707905 2710394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0204 60 388 Carbohydrate Esterase AT5G61570 57.270 4.92e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi14g0204 PK_Tyr_Ser-Thr 1.1e-31 CL0016