Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0178 ATGGCTCCATTCACTTCTCGCTTTCAAGAATCAGTCACCCGACATGCCCTTCGCTCCTATCTTGCTGAGTTCATCTCCACTTTCTTCTATGTCTTTGCCGTGATCGGCTCCGGCATGTCTTCCAGGAAGTTGATGCCTAATGCTGCCTTAGACCCTTCCAGTTTGGCTGTAGCAGCCATTGCAAATGCCTTCGCTTTGTCCTCTGTTGTGTTTGTTGCTTGGGACGTCTCTGGGGGACATGTAAACCCTGCAGTGACCTTCGGAATGGTGGTTGGAGGCCACATGAGCGTATCAACTGCTCTGTTCTACTGGGTTTCTCAGATCATAGCCTCTGTTATGGCTTGCCTTGTCCTGAAGATCACTGTGGTTGGAATGCATGTTCCAACATACTCAATTGCACCAGAAATGACAGGGTTTGGGGCATCCCTATTGGAGGGTGTCCTAACATTTGCTTTGGTGTACACTGTGTATGCTGCCAGGGACCCTAGGCGAGGTCCATTGGGCTCCATGGGTGCCCTAGCAATCGGCTTAATAGCCGGGGCAAATGTCCTGGCTGCAGGTCCATTCTCTGGTGGGTCAATGAACCCTGCATGTGCTTTCGGCTCTGCTGCAATTGCTGGGAGTTTCAGGAACCAAGCGGTGTATTGGGTTGGACCCCTGATTGGGGCTGCTATTGCTGGCCTTCTCTATGACCATGTGGGGTTCCCTTCGCAGACTGCAGATTCAATCAGAGGGGCTATAGAAGGAGTAGGAGTGTGA 759 0.5165 MAPFTSRFQESVTRHALRSYLAEFISTFFYVFAVIGSGMSSRKLMPNAALDPSSLAVAAIANAFALSSVVFVAWDVSGGHVNPAVTFGMVVGGHMSVSTALFYWVSQIIASVMACLVLKITVVGMHVPTYSIAPEMTGFGASLLEGVLTFALVYTVYAARDPRRGPLGSMGALAIGLIAGANVLAAGPFSGGSMNPACAFGSAAIAGSFRNQAVYWVGPLIGAAIAGLLYDHVGFPSQTADSIRGAIEGVGV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0178 252 Pfam Major intrinsic protein 13 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Glsi14g0178 252 SUPERFAMILY Aquaporin-like 9 237 IPR023271 -
Glsi14g0178 252 PRINTS Major intrinsic protein family signature 18 37 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi14g0178 252 Gene3D Glycerol uptake facilitator protein. 4 244 IPR023271 -
Glsi14g0178 252 FunFam Probable aquaporin TIP5-1 2 242 - -
Glsi14g0178 252 PANTHER AQUAPORIN-8 4 233 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0178 Glsi-ChrGlsi14 2423652 2425962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0178 4 243 Major Intrinsic Protein MIP AT3G47440 64.634 2.13e-108 311