Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0177 ATGTACATCAAAGAGATTTGCTTGGAAGGTTTCAAATCGTATGCTACCAGAACTGTTGTTCCTGGTTTCGATCCCTATTTTAATGCCATTACGGGGTTGAACGGTTCCGGCAAATCAAACATACTCGATTCGATTTGCTTTGTACTGGGTATCACGAATTTGCAGCAGGTTCGGGCTTCTAACCTTCAGGAGCTCGTGTATAAGCAAGGGCAGGCAGGGATTACCAAAGCTACGGTGTCGGTTGTGTTTGATAATACGGATAGGACTCGGAGCCCGCTTGGGTATGAAGACCATCCAGAGATTACAGTGACAAGACAGATTGTGGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCTAGTCAAGTTCAAAACCTTTTTCATTCGGTGCAGCTAAATGTTAACAATCCACATTTTCTTATAATGCAAGGGCGCATCACGAAGGTTCTAAATATGAAACCACCAGAGATATTATCTATGCTTGAGGAAGCTGCAGGGACAAGAATGTATGAGACGAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAATAAGGTTGATGAGATTAATAATCTTCTTGACCAGGAGATATTACCTGCTCTAGAGAAGTTAAGGAAAGAAAGGATGCAGTACATGCAGTGGGCTAATGGCAATGCTGATTTAGATAGGCTGAGAAGGTTTTGTGTTGCTTATGAGTATGTTCAAGCAGAGAGGATTAGAGACAATGCAGTGACTGAGGTGGAACAAGTGAAGGCCAAGATAGCTGAGGTTGATGACTGTACTAAGATAAAACAGGTGGAAATACAGGAAATGGAGACCAAAATAGCAAAGTTGACTGCTGAAAAGGAAGAATGCATGGGTGGAGAAGTAAAATCTTTGTCAGAGAAGGTAGATGCACTTTCACAGAATCTTGTGAGGGAAACATCTATACTAATTAATAAAGAGGACACTTTGAAAAGTGAAAAAGCCAACGAAGGAAATATCGTGAATAATATTGAAGACTTGAAGCAATCTGTTGAAGAGAAGGCCTTGGCTGTAAAAAAGGCTGAAGAGGGATCTGTTGATCTGAAAAGTAGAGTTGACGAGCTTTCTAAGAGTCTGGAGGAACATGAAAAGGAATATCAGGGTGTATTAGCTGGCAAGAGCAATGGAAATGAGGAGAAATGCTTAGAGGATCAATTAGCTGATGCAAAGGTAGCAGTTGGGAGTTCTGAGACAGAATTGAAACAGCTGAAAACCAAAATTAGCCATTGTGAAAAGGAACTGAAAGAGAAAACACATCAATTAAGGTCAAAACGGGAGGAAGCTATTACTGTAGAAAATGAGCTCAATGCTAGAAGGAAAGATGTGGAGAATGTCAAGATGGAGTTTGAGTCTCTTCCTTATAAAGATGGTGAGATGGAATCTCTGCAAAAGGAGCGTGCATCTGAGATGGAGTGGGTGCAAAAGTGGAAGGATGAAATACGAAATCTTTCAGCACAATTAGCAAATGTTGAATTTACATACCGTGACCCAGTCAAGAACTTTGATAGGTCAAAGGTGAAAGGTGTGGTTGCAAGACTCATCAAAGTTAAGGATAGGAACACGATGACAGCCCTAGAGGTTACTGCTGGTGGAAAGTTGTTCAATGTTGTTGTTGACACAGAAAATACAGGAAAGCAATTACTACAGAATGGTGATTTAAGAAGAAGAGTGACAATTATTCCTTTGAACAAAATACAATCCCACTCTGTTCCCCCTAGAATTCAACAGACTGCTGTTAGATTGGTTGGTGAGGAGAATGCTGAACTGGCACTTTCTTTGGTTGGTTATGAAGAAGAATTGAAGAGAGCTATGGAATATGTATTTGGTTCAACCTTTGTTTGCAAAACCACAGATGCTGCAAAGGAGGTGGCATTTAATCGGGAGATTCGCACCCCAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGGAAGGGTGGTGGTCAACTTTTAAGGCAACTTCATGATTTAGCTGAGGCTGAGTCCAAACTTTCGATCCATCAAAGAAGGTTGTCTGAGGTTGAGGCAAAGATTACAAAGCTCCTTCCTCTTCAGAAAAAATGGCAGGATCTCAAAGCACAATTAGAACTTAAGTCATATGATCTTTCATTGTTCCAAAGTAGAGTTGAGCAAAATGAACATCATAAGCTTGGGGAACTAGTGAAGAAGATTGAGCAAGAGCTTGCAGAAGCAAAATCTGCTGTCAAGGAAAAACAACTTCTTTACGAAGATTGTGTCAAGACCGTTTCATTGCTTGAGAAATCAATCAAAGAACATGGCAATAATCGTGAGAGTAGGCTAAAAAACTTAGAGAAAAAGATAAAGTCAATCAAATCTCAGATGCAGTCATCTTTAAAAGATCTCAAGGGACATGATAATGATAAAGAGAGGCTTGTTATGGAAATGGAAGCAGTAATCCAGGAGCGTGTATCCTTGGAGAATCAATTAGCTTCTTTGAGGATACAGAATAATAGTCTTGCCTCAGAAGTAGAAGAACAAAAATTCAGGGTTTCTGCTGCAAGGAATGATCATGATCAGGTTCAGTCAGAGCTGAATTCAGTTCGCCTAAAAATGAAGGAATGTGATAAGGAAATTAGTGGTATTATGAAGGAGCATCAGAAGCTTGAACATAAACTTAGTGAGAGTAATCTTGAAAGGAAGAGAATGGAAAACGAGGTAAAACGGATGGAGACAGAACAGAAAGACTGTTCTCTCAGGGTGGATAAATTGATAGAGAAGCATGCATGGATTGCTTCTGAAAAACAGTTGTTTGGTAGAAGTGGGACCGATTATGATTTTTCTTCCCGTGATCCTGGTAAAGCAAGGGAAGAGCTTGAAAATCTTCAGGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGGCAATGTTTGAGAAGGCAGAGGATGAGTATAATGATTTGGTGTCCAAGAAAAACATAATTGAGAACGACAAGTCTAAAATCAAGAAGGTGATTGAAGAGCTAGATGAGAAGAAGAAGGAAACACTAAATGTTACCTGGGTCAAAGTTAACAATGACTTTGGATCCATCTTTTCTACCTTGTTACCGGGCACAATGGCTAAGTTAGAACCTCCTGAAGGATGTAGTTTTCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAACAGTCCTTATCAGAACTGAGTGGAGGTCAACGATCACTGCTTGCACTTTCGCTGATTCTGGCACTGCTTCTATTCAAACCTGCTCCACTTTACATCCTTGATGAGGTTGATGCGGCTCTTGATTTAAGCCACACACAAAACATAGGGAGAATGATAAAGGCTCACTTTCCACACTCCCAATTTATTGTGGTTTCACTGAAGGAAGGAATGTTCAATAATGCAAATGTTCTTTTTCGGACAAAATTTGTGGATGGTGTCTCAACTGTTCAGCGAACTGTTGCAGCCAAGCAGAGCAAGTGA 3531 0.4056 MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSVVFDNTDRTRSPLGYEDHPEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQNKVDEINNLLDQEILPALEKLRKERMQYMQWANGNADLDRLRRFCVAYEYVQAERIRDNAVTEVEQVKAKIAEVDDCTKIKQVEIQEMETKIAKLTAEKEECMGGEVKSLSEKVDALSQNLVRETSILINKEDTLKSEKANEGNIVNNIEDLKQSVEEKALAVKKAEEGSVDLKSRVDELSKSLEEHEKEYQGVLAGKSNGNEEKCLEDQLADAKVAVGSSETELKQLKTKISHCEKELKEKTHQLRSKREEAITVENELNARRKDVENVKMEFESLPYKDGEMESLQKERASEMEWVQKWKDEIRNLSAQLANVEFTYRDPVKNFDRSKVKGVVARLIKVKDRNTMTALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPLNKIQSHSVPPRIQQTAVRLVGEENAELALSLVGYEEELKRAMEYVFGSTFVCKTTDAAKEVAFNREIRTPSVTLEGDIFQPSGLLTGGSRKGGGQLLRQLHDLAEAESKLSIHQRRLSEVEAKITKLLPLQKKWQDLKAQLELKSYDLSLFQSRVEQNEHHKLGELVKKIEQELAEAKSAVKEKQLLYEDCVKTVSLLEKSIKEHGNNRESRLKNLEKKIKSIKSQMQSSLKDLKGHDNDKERLVMEMEAVIQERVSLENQLASLRIQNNSLASEVEEQKFRVSAARNDHDQVQSELNSVRLKMKECDKEISGIMKEHQKLEHKLSESNLERKRMENEVKRMETEQKDCSLRVDKLIEKHAWIASEKQLFGRSGTDYDFSSRDPGKAREELENLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLVSKKNIIENDKSKIKKVIEELDEKKKETLNVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQSK 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0177 1176 Coils Coil 736 763 - -
Glsi14g0177 1176 Coils Coil 487 507 - -
Glsi14g0177 1176 Coils Coil 178 198 - -
Glsi14g0177 1176 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Glsi14g0177 1176 Gene3D - 1 202 IPR027417 -
Glsi14g0177 1176 Coils Coil 239 259 - -
Glsi14g0177 1176 Coils Coil 407 448 - -
Glsi14g0177 1176 FunFam Structural maintenance of chromosomes 2 518 586 - -
Glsi14g0177 1176 Coils Coil 338 379 - -
Glsi14g0177 1176 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Glsi14g0177 1176 PIRSF SMC 1 1156 IPR024704 GO:0005524|GO:0016887
Glsi14g0177 1176 Gene3D - 812 896 - -
Glsi14g0177 1176 Coils Coil 817 851 - -
Glsi14g0177 1176 Coils Coil 989 1026 - -
Glsi14g0177 1176 Coils Coil 866 928 - -
Glsi14g0177 1176 SUPERFAMILY Smc hinge domain 479 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Glsi14g0177 1176 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1173 - -
Glsi14g0177 1176 FunFam Structural maintenance of chromosomes 2 995 1174 - -
Glsi14g0177 1176 Coils Coil 267 287 - -
Glsi14g0177 1176 Pfam RecF/RecN/SMC N terminal domain 2 1161 IPR003395 -
Glsi14g0177 1176 Coils Coil 782 809 - -
Glsi14g0177 1176 Gene3D - 426 591 - -
Glsi14g0177 1176 Gene3D - 995 1175 IPR027417 -
Glsi14g0177 1176 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Glsi14g0177 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1157 IPR027417 -
Glsi14g0177 1176 FunFam Structural maintenance of chromosomes 2 1 202 - -
Glsi14g0177 1176 Coils Coil 679 699 - -
Glsi14g0177 1176 Gene3D - 592 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0177 Glsi-ChrGlsi14 2404886 2417431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0177 3 170 Structural Maintenance of Chromosomes family AT5G15920 23.214 2.89e-07 53.1