Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0172 ATGAAACCTTTTCTTTTCTTTCTCATGTTCTCCTTCTTTTGCCAAATATACCTAGTTTCCTCTGCTACAACTCTGCCCCTCCAACTCATCTCTCTGCTTTCACTAAAATCTTCCTTCGTAGACCCTCTCAGGAAAATCCATGACTGGGACCCCTCCCCCATCTTCTCCAAGTCCAATAACCAAGACCCAGTTTGGTGTTCATGGTCAGGTATCACATGCCACCCGAAGACAGCCCAAATCACCTCCCTTGACCTCTCTCACCGCAACCTTTCCGGCACAATTTCACCTGAAATCCGGTACTTGCTGACCTTAAACCACTTGAATCTAAGTGGAAATGACTTGAGTGGAACTTTCCAAGCAGCAATTTTCGAACTTCCCGAGCTGAGGACCCTAGATATCAGCCACAACTCCTTCAACTCAACTTTCCCTCCTGGGATATCGAAGCTCAAGTTCTTGAGGATCTTCAATGCATACAGCAACAACTTCATCGGTCCTCTACCTCAAGAATTCATCAGACTCAGGTTTCTTGAGCAGCTCAACCTTGGTGGGAGCTACTTCAACGACAGAATTCCTTCAGGTTATGGCAGTTTCCCAAGATTGAAGTTCCTTTATTTGGCTGGCAATGTCTTGGAAGGTCCAATACCACCTCAGATAGGCTTCCTAGGACAGCTAGAACGCTTGGAAATCGGATACAACCAGTTTTCAGGAGGACTACCAGTGGAATTGGCATCCTTATCTAGGCTAAAGTACTTAGATATCTCCTCTGGTAACCTTTCTGGCTCTCTGATCCCAGAACTCGGCAACTTGACCATGCTGGAGAACTTGTTGCTCTACAAGAATCGCTTCACTGGTGAAATCCCATCAAGCTTAGGCAATTTGAAAGCTCTCAAGGCTCTTGATTTGTCAGATAACCAGCTCACCGGGTCTATTCCTACAGAACTTACCATGTTAAAGGAACTAAACATTTTGAGCTTAATGGACAACAAGCTAGCAGGTGACATACCAGAAGGGATTGGAGACCTTCCCAACCTCGAAACTCTGCATCTATGGAACAATTCATTCATTGGGATTCTCCCACAAAAGCTTGGTTCAAATGGGTTACTCCAGAGACTAGATGTATCCACAAATTCACTCACAGGTCCTATCCCACCAAATGTTTGCGATGGAAACAAGCTCGTCAAGCTCCTACTCTTCAACAACAAATTTGATAGTGCACTCCCAGCATCACTGACAAAATGTACCTCATTAACAAGGCTTAGAATCCAAAACAACCATCTCAACGGTTCAATCCCATCTGGTTTTGGTCTCCTCCCGAACTTGACCTTCGTTGATATGAGCAACAACAACTTTGTGGGTCAAATTCCTGAAGATTTTGGCAATGCCATCAAAATACAGTACCTGAACATCTCTGGAAACTCCTTCGAAAACTCATTACCAAGTAACATCTGGAACGCCACCAATCTTCAGATTTTCTCAGCAAGTTCGTCGAAAATCGTTGGCCAGATCCCAGATTTCATCGGGTGCCAGAGCGTCTACAAAATCGAGTTACATGGAAATTCTCTGAACGGTAGCATCCCTTGGGACGTTGGGCACTGCGAGAAGCTTATTCTACTGAATCTGAGCCGCAATTCCCTCACGGGTATTATCCCTTGGGAAATCTCTACTCTTCCTTCCATCACTGACGTCGACCTCTCTCACAATTTCCTCACCGGCTCCATACCCTCCAACTTCAACAACTGCACCACCCTCGAAAACTTCAATGTCAGTTACAACCTCCTAACCGGACCCATTCCTTCGTCGGGCTCAACCTTCCCGAACCTGCACCCCTCCTCTTTCACAGGCAACGACGGCCTCTGCGGCGGCATTCTAGCAAAACCGTGCGCGGCGGACACCCTTGCCGCCGAGAACAACGAGGTCGAGCTTCATAAGCAGCAGCCCAAAAGAACCGCCGGTGCAATCGTGTGGATAATCGCAGCGGCGTTCGGGATCGGCCTCTTCGTGCTCGTCGCCGGAACCCGCTGCTTCCGCGCAAATTACAGCCGTCGATTCAGCGACGATCAGGAGATCGGACCGTGGAAACTAACGGCGTTCCAACGTCTCAATTTCACGGCGGAGGACGTCCTCGAATGCTTGTCAATGTCCGATAAGATCATAGGGATGGGATCCACAGGGACGGTGTACAAGGCGGAGATGCCAGGTGGCGAGATCATAGCGGTGAAGAAGCTGTGGGGCAAGCAGAAGGAGAACAACATCAGACGGAGGAGAGGGGTTTTAGCGGAGGTTGAAGTACTGGGGAACGTGAGGCACAGGAACATAGTGAGACTGTTAGGGTGCTGCAGCAACAGGGAGTGCACGATGCTGCTGTACGAGTATATGCCCAATGGGAATTTAGATGATTTATTGCATGGCAAAAATAAAGGGAATAATCTGGTAGCTGATTGGTACACAAGGTACAAGATAGCCTTGGGTGTGGCTCAGGGGATTTGCTATCTTCACCACGACTGTGATCCAGTGATTGTGCACCGTGATCTCAAGCCAAGTAATATACTATTGGACGGCGAGATGGAGGCCAGAGTGGCAGATTTCGGAGTGGCCAAGTTGATTCAGAGTGATGAGTCCATGTCTGTCATTGCTGGATCCTATGGCTACATTGCACCAGAATATGCTTATACCCTACAAGTCGACGAGAAAAGTGATATTTACAGCTACGGAGTGGTGTTAATGGAGGTTTTAAGTGGCAAACGATCCGTCCACGCAGAATTTGGCGACGGAAATAGCATTGTGGATTGGGTTAGGTCTAAAATCAAGACCAAAGATGGCATTGATGACATACTGGATAAGAATGCTGGAGCCGAGTGCACTTCGGTGAGAGAAGAGATGATACAGATGCTCAGAATTGCATTGCTTTGCACCAGTCGAAACCCAGCAGACCGACCTTCCATGAGAGATGTTGTGTTGATGCTACAAGAGGCAAAGCCAAAGAGGAAATTGCTTGATAGTGTGATAGGCATATGCGGTGGTGGAGATGATAATAGGGTGGTTGATAATAGTGGTGGCGGTGGCGACGAGATGCCTTTGGCATGCCAAAGTTTACCGGGGAAAGCTAATATGTTCATATGA 3120 0.4766 MKPFLFFLMFSFFCQIYLVSSATTLPLQLISLLSLKSSFVDPLRKIHDWDPSPIFSKSNNQDPVWCSWSGITCHPKTAQITSLDLSHRNLSGTISPEIRYLLTLNHLNLSGNDLSGTFQAAIFELPELRTLDISHNSFNSTFPPGISKLKFLRIFNAYSNNFIGPLPQEFIRLRFLEQLNLGGSYFNDRIPSGYGSFPRLKFLYLAGNVLEGPIPPQIGFLGQLERLEIGYNQFSGGLPVELASLSRLKYLDISSGNLSGSLIPELGNLTMLENLLLYKNRFTGEIPSSLGNLKALKALDLSDNQLTGSIPTELTMLKELNILSLMDNKLAGDIPEGIGDLPNLETLHLWNNSFIGILPQKLGSNGLLQRLDVSTNSLTGPIPPNVCDGNKLVKLLLFNNKFDSALPASLTKCTSLTRLRIQNNHLNGSIPSGFGLLPNLTFVDMSNNNFVGQIPEDFGNAIKIQYLNISGNSFENSLPSNIWNATNLQIFSASSSKIVGQIPDFIGCQSVYKIELHGNSLNGSIPWDVGHCEKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNFLTGSIPSNFNNCTTLENFNVSYNLLTGPIPSSGSTFPNLHPSSFTGNDGLCGGILAKPCAADTLAAENNEVELHKQQPKRTAGAIVWIIAAAFGIGLFVLVAGTRCFRANYSRRFSDDQEIGPWKLTAFQRLNFTAEDVLECLSMSDKIIGMGSTGTVYKAEMPGGEIIAVKKLWGKQKENNIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGNNLVADWYTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEVLSGKRSVHAEFGDGNSIVDWVRSKIKTKDGIDDILDKNAGAECTSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVIGICGGGDDNRVVDNSGGGGDEMPLACQSLPGKANMFI 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0172 1039 Pfam Leucine Rich Repeat 534 555 IPR001611 GO:0005515
Glsi14g0172 1039 SUPERFAMILY L domain-like 367 620 - -
Glsi14g0172 1039 SMART LRR_typ_2 437 460 IPR003591 -
Glsi14g0172 1039 SMART LRR_typ_2 556 579 IPR003591 -
Glsi14g0172 1039 SMART LRR_typ_2 341 365 IPR003591 -
Glsi14g0172 1039 SMART LRR_typ_2 293 317 IPR003591 -
Glsi14g0172 1039 SMART LRR_typ_2 125 149 IPR003591 -
Glsi14g0172 1039 SUPERFAMILY Protein kinase-like (PK-like) 715 988 IPR011009 -
Glsi14g0172 1039 FunFam Leucine-rich repeat receptor-like protein kinase TDR 314 629 - -
Glsi14g0172 1039 Gene3D Ribonuclease Inhibitor 318 635 IPR032675 -
Glsi14g0172 1039 Gene3D Transferase(Phosphotransferase) domain 1 792 1001 - -
Glsi14g0172 1039 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 680 791 - -
Glsi14g0172 1039 SMART serkin_6 712 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0172 1039 SUPERFAMILY RNI-like 82 427 - -
Glsi14g0172 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Glsi14g0172 1039 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Glsi14g0172 1039 PANTHER RECEPTOR-LIKE PROTEIN 55 376 990 - -
Glsi14g0172 1039 Gene3D Ribonuclease Inhibitor 29 317 IPR032675 -
Glsi14g0172 1039 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Glsi14g0172 1039 Gene3D Phosphorylase Kinase; domain 1 682 791 - -
Glsi14g0172 1039 ProSiteProfiles Protein kinase domain profile. 712 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0172 1039 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 72 264 - -
Glsi14g0172 1039 FunFam leucine-rich repeat receptor-like protein kinase TDR 792 1000 - -
Glsi14g0172 1039 Pfam Protein kinase domain 715 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0172 Glsi-ChrGlsi14 2320781 2325153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0172 3 1003 Receptor kinase-like Gene Family AT1G08590 42.636 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0172 Pkinase 3.2e-48 CL0016