Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0159 ATGGTGTCAAGCTTTTATTCTGAGTTTTCCGCAGTGTCTGATGCTCTTTTATGGTGGTGGGCTGTTCTGGGTGATTGCAAAGTGGGTTTGCTTGCTTCTTTGTCTAATTTGTATTCTGGGGTTGTTTGTACGCGATCCTTCCTCCTTGGTAATGTTGCAATGGATCATCCAAATCCTTATGGATCTGACGAACTGGACTCACTGCCACCTCCACCAGCCACCATCCCTGCACATGTTCCCTGTAAAGCAGAATCAGGAAAACCAAAGGAGCCAGAATTCAACAAAAAAGTTCATGACCCAGTGAAAAAAATATCAAATCCAAAACGTTTGCCTATGGCCAGGCGGAGTGTTGGATCCAAGGGCCAAAGAATAATGCTGTTGACTAACCATTTTAGAGTTGGCGTGGGCAAGAAAGATGGTTACTTCTATCATCACAGTGTTGCCCTGTTCTATGAAGACGGACGCCCGGTTGAAGCTAAGGGTATTGGCAGAAGAGTCATAGACAAAGTGGTTGGAAGAAATAGAGGTCCTGACAACCCCGATGAAGGTGATATCAAGCGAATGGGGCGTCAATCTCAGTCCAAAACCTACAAGGTAGAGATTAGTTATTCTGCTAAAATTCCTATACAAGCAATTGTGGATGCATTACGTGGCCAGGAATCTGAGCACTTTCAAGAAACTTTAAGGATTCTGGATATCATATTAAGGCAGCATGCAGCAAAGCAGGGCTGTCTAATTGTCCGTCAATCTTTCTTCCATGACAATGCAAGAAATTACACAGACATAGGAGGTGGTGTTCTAGGTTGCCGTGACTTTCATTCTAGCTTCCGAGCCACGCAAGGGAGTTTGTCCCGTAACATTGATGTGTCAACAACAATGCTTTTAAAGCCTGGCCCAGTAATGGAGTACTTCCTTTGCTTGAATCAAGATGTTGATCATCCTCGCCTAATTGATTGGGCCAAGGTGACAAATTTATCCTATTGTCATCTGGGATTGGTGATCGCAGTTTCCTTCGCTTTTCCGAAAGATAACTGA 1035 0.4406 MVSSFYSEFSAVSDALLWWWAVLGDCKVGLLASLSNLYSGVVCTRSFLLGNVAMDHPNPYGSDELDSLPPPPATIPAHVPCKAESGKPKEPEFNKKVHDPVKKISNPKRLPMARRSVGSKGQRIMLLTNHFRVGVGKKDGYFYHHSVALFYEDGRPVEAKGIGRRVIDKVVGRNRGPDNPDEGDIKRMGRQSQSKTYKVEISYSAKIPIQAIVDALRGQESEHFQETLRILDIILRQHAAKQGCLIVRQSFFHDNARNYTDIGGGVLGCRDFHSSFRATQGSLSRNIDVSTTMLLKPGPVMEYFLCLNQDVDHPRLIDWAKVTNLSYCHLGLVIAVSFAFPKDN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0159 344 Pfam N-terminal domain of argonaute 180 235 IPR032474 -
Glsi14g0159 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 100 311 - -
Glsi14g0159 344 Pfam Argonaute linker 1 domain 247 294 IPR014811 -
Glsi14g0159 344 SUPERFAMILY PAZ domain 195 304 IPR036085 GO:0005515
Glsi14g0159 344 SMART DUF1785_2 245 297 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0159 Glsi-ChrGlsi14 2108592 2111128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0159 99 322 Eukaryotic Initiation Factors Gene Family AT1G48410 28.235 2.91e-17 81.3