Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0151 ATGGACCTGAAGTCAAATCATACTCCTGTTCTTACTGATTCTGCCCCCATAGTGAAGTCAAGACTGGGTATGCATTCCAGTCTGCTGCCTTATTCTCCTACAGGGGCAACTTTTCCACATAGTCTGCTTCTGACAATCCCAAGGAAGAAGACAGGAATTCTTGAAGATGTTCGTTCTATTAGTTGGCTGGATGCCATGAAATCATCTTCTCCTACGGCGAAGAAGATAACAAAGGATATTAATCATGGGTTTGCTTCATCTGATGCTGATAGTGCTTACAGTACCTGGCTGCTAAAGTATCCATCAGCAATTACATCTTTTGAGCTAATTACAAATTATGCAAAAGGCAAGAGAATAGCACTGTTTCTGGATTATGATGGGACTCTTTCACCAATTGTGGATAATCCTGACTGTGCATTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAGGTGGCAGAGCTTTTTCCTACGGCAATAATTAGTGGAAGAAGTCGTGACAAGGTATATGAATTTGTAGGACTAACGGAACTCTATTATGCTGGTAGTCATGGGATGGACATCATTGGTCCTGTCAGACAATCTGTATCTGATAACCACCCTAATTGCATTAGGTCTACTAACAAGCAGGGCAAGGAAGTTAATTTATTCCAACCGGCTGCTGAATTCTTGCCTGTGATTGATGAGGTGTTTAAGTCCCTTGTTGAAAGTACAAAAGACATTAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTCTCTGTACACTATCGCAATGTAGATGAGAAGAGTTGGGATACAGTGGGACAACGTGTCCATGATATTCTGAAGGACTATCCATGTTTGCGATTAACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGAGATCAGTTGGGATAAGGGGAAAGCTGTTACATTTTTACTGGAGTCACTAGGACTTAGCAACTGTGATGATGTGCTCCCTATATATGTTGGAGATGATCGGACTGACGAAGATGCATTTAAGGTTCTGAGAGAGGGAAATAGAGGTTATGGCATCTTAGTTTCTTCTGTACCCAAGGAAAGCAAAGCAGCTTACTCTCTCCGTGATCCATTAGAGGTCATGGAATTTCTCAAGTCACTTGTGGTTTGGAAGTCAAGCCTCCTCAAAAGCCTTATATAG 1164 0.4175 MDLKSNHTPVLTDSAPIVKSRLGMHSSLLPYSPTGATFPHSLLLTIPRKKTGILEDVRSISWLDAMKSSSPTAKKITKDINHGFASSDADSAYSTWLLKYPSAITSFELITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAELFPTAIISGRSRDKVYEFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTNKQGKEVNLFQPAAEFLPVIDEVFKSLVESTKDIKGAKVENNKFCVSVHYRNVDEKSWDTVGQRVHDILKDYPCLRLTHGRKVLEVRPEISWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNRGYGILVSSVPKESKAAYSLRDPLEVMEFLKSLVVWKSSLLKSLI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0151 387 NCBIfam trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Glsi14g0151 387 CDD HAD_TPP 120 370 - -
Glsi14g0151 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 381 IPR044651 GO:0004805|GO:0005992
Glsi14g0151 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
Glsi14g0151 387 Pfam Trehalose-phosphatase 122 365 IPR003337 GO:0003824|GO:0005992
Glsi14g0151 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Glsi14g0151 387 SUPERFAMILY HAD-like 120 378 IPR036412 -
Glsi14g0151 387 Gene3D - 225 384 IPR023214 -
Glsi14g0151 387 Gene3D - 119 211 IPR023214 -
Glsi14g0151 387 FunFam Trehalose 6-phosphate phosphatase 119 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0151 Glsi-ChrGlsi14 2009473 2012570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0151 109 375 Trehalose Biosynthesis Gene Families AT1G70290 25.784 5.89e-12 65.5