Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0131 ATGGCCAAGGCCTTCCCTCTTCTCCTGCTTCTCTCTGTTTTGTGCATCGCAGCCATAGCCAAGGCTGCCCCATATGATTTCATCAAGTCCTCCTGCAGTACCACGCGATACCCAGGACTCTGCGTCAAAAGTCTCGCAGATTATGCCTCCACAATCCAACAGGACCCGCACAGACTGGTCCAAACAGCCCTGTCCCTCAGCCTGAACGTGACCCTCTCCACCAAGGATTATGTATCGAAGCTGAACAAGTTCAGGGGGCTGAAGGCCAGAGAGTATGCTGCTCTGCGTGATTGTGTGGAAGAGATCACTGACAGTGTGGACAGGCTCAGCCGTTCTCTGAAGGAGCTCAAGCTGTGCAAAGCCAAGGGCGAGGATTTCACATGGCACATAAGTAATATGGAGACATGGGTTAGTTCTGCCTTGACAGATCAGAGCACTTGCAACGATGGGTTTGCAGGAAGAGGATTGAATGGCAGAATCAAATCTTCTATTAGGACCAAGATCGTTAATGTTGCTCAGGTCACTAGCAATGCTCTAGCACTAATCAACATGTATGCCTCAAACCACTGA 570 0.5018 MAKAFPLLLLLSVLCIAAIAKAAPYDFIKSSCSTTRYPGLCVKSLADYASTIQQDPHRLVQTALSLSLNVTLSTKDYVSKLNKFRGLKAREYAALRDCVEEITDSVDRLSRSLKELKLCKAKGEDFTWHISNMETWVSSALTDQSTCNDGFAGRGLNGRIKSSIRTKIVNVAQVTSNALALINMYASNH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0131 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Glsi14g0131 189 NCBIfam pectinesterase inhibitor domain 7 185 IPR006501 GO:0004857
Glsi14g0131 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 185 IPR035513 -
Glsi14g0131 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 181 - -
Glsi14g0131 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
Glsi14g0131 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 185 IPR035513 -
Glsi14g0131 189 FunFam Pectin methylesterase inhibitor 1 23 185 - -
Glsi14g0131 189 CDD PMEI-like_3 30 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0131 Glsi-ChrGlsi14 1793045 1793614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0131 28 184 Carbohydrate Esterase AT3G14310 32.704 4.82e-21 88.2