Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0127 ATGTCGAGCCCTCCGCCGCCGTCTCGTTTTTCAAGGTCACCTCCGGCGAACCTCGCCGAGAAGAATCCGACTCCGGAGACAACGTTGCAACATTTGAAGCCGTCGCCGGTAGACACCAGATCCAAGCTTCAGAAAATTCCTCCGATTCCATCTCAACGGGCTGCGATAGCTGAAGAAGGCGAAAGCGATGACGAGGTGGAAGATGAAGGTGACGGTGATGACAGGGAGCTAACCGAAGGTGCTGCTTCGTCGATTTTGCTTGCATCAACTTTAGGGCTTAATCACATCCGGACACGCTCGGCTCCTTCGCCTCTTCGGTTTCCGTCCTTGGTTGGCGGCACATCTTCGAATTTGAGCAAGGATGCTGTCAAGATTCACGATGGGATTGACGCCAAACCGAATTTGAAAACTTCTCGCCTAAATGTTGCTTCAATGGAACCAGGAAAAAAAATTCACATGAGTCAATGCAAATCGTCGAGAGTTCCTTCACATTTCCTTCCTGTGCTAGAGGGTAATAATGAAGCTTTTGCCAGAGAAATGCAGTCCCCACGTTTTCAGGCAATACTGCGTGTTACAAGTGGACGCAAGAAGAGGAAACCTGAAATAAAAAGCTACTCTCACGAGCTCAACTCAAAAGGAGTTAGAGCTTTTCCAGTTTGGAAAAATCGGGCATTTTGGCACATGGAGGAGGTCATGGTGGCAGTCAGAACTAAGTTTGAAAAATTAAAGGAAGAAGTTGATTCTGACTTGAGTGCTTTTGCTGGAGATTTGGTGGGTATTCTCGAAAAAACTTCTGGGTCTCGTCCAGAATGCAAAGAAAGTTTGGAGGATCTGTTGGTTGTTGCCCGACAATGTGCAATGATGTCACCTAGTGATTTTTGGATGAAGTGTGAATCTATTGTTCAGAATTTAGATGACAAGCGTCAAGAGTTACCAATGGGGATCCTCAAGCAAGCTCATACACGCCTACTTTTTATCCTCACTCGGTGCACTCGTCTTGTGCAATTCCAGAAAGAGAGCGGCTACGAACAAGATCACATTCTGGGTCTTCACCAACTTAGTGATCTTGGAGTTTATCCGGAGCAAATTTTGCAGGCTGCACAACAGAAATCCAGTGTTCTTTCAGGTGGACATGAGATGACTGAGAAGCAGTTGAAAAAATCACATGGTAAAGAAGAAGAGAATCTGATAATAAAACAAAGTCACGCTGATCAAAATGTAAGTTCTGCTACTGACAGTGTGGACGTTGCCACTGCCAAGAGTGTTGATTCATGTGCAAGCAGCTATAGGATGTCCTCTTGGAAAAAGTTTCCACTTCCTGCTGAGAAGAAGTGTAAAGGTCAGGATGCTGCAGATGTGCCATCGAAAAGTGAACTGGATCAGATGCAAGTCAAAGATGAACATGCCGAAAACTTGGATAGTTTATCATGTAATCCTGAACATTCAGAGCCATCATCCAGAACGCAAAAGGTTACTTGGGGGTTCTGGGGAGATCATCATAATCTAACATACGAGGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCACTCTCAAATATGCACAATTGCAGATAGATGTGATTTGAAAGGCTTAACTATAAATGAACGGATTGAAAGAGTCGCTGAGACAATTGAAAAAATACTGGAATCATGGACACCGAAAAGCACACCAAAAAGCACTGATGCTCCTGGAGAAAGCTTTGGGTTTGCTCGAGTATCTATGTCAAGTATGCATGAAGAGTTCAATGAGTTATCTATAGAGAGAAACAGCCTGTCTTGTAGATACACTGAGGACCTGCTTGACCCTGCTCCTGAAGCTGACAATACTTTTGTTAAGGATGATTTGAACCTTTTGCCGAAAATATCATGTGAAACACATGCCTGCTTCAAACCTGATCAAGGCACAAAGGTGTCTTCACCTGGAAGCTTGACACCTAGATCACCATTGTTAACACCACGAACAAGTCAGATAGAAATGTTACTAAGTGGACAAAGAACAATATCTGAACTTGAGAGTTATTCCCAGCTTTCACCTTGTCCTCCTCAAGGTGAGTTGAAGCTAATGTTTGGTGGCTTGGAGAAGTACGTATATCTTTGTGGGCAGATAGAAGATGAAAAGGTGGATTCATCAAATGGCATGGTTGATGAAGAGAGCTCAGTGGAAGATGATACTATCCGTAGCATCCGTACTAGCCCAATTAATCCTTGTTCTAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGCCGCGGAGCATTTGGACGAGTTTTCCTTGCCCGTAAAAGAGCAACCGGTGATTTGTTTGCTATAAAGAATGCCTTGGGGACAAAGGTTTTGAAAAAGGCTGATATGATTCGTAAAAATTCAGTTCAAAGTATTTTGGCTGAGCGAAACATCCTTATATCAGTTCGAAATCCCTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGAGAAAATCTTTATCTAGTTATGGAATATTTAAACGGTGGAGACCTTTATTCTCTACTGAGAAATCTAGGTTGCTTAGATGAAGACATGGCACGTGTATATATAGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTACATATAATTCACAGAGACTTGAAGCCCGATAACTTGTTGATTGGCCAAGATGGTCACATCAAGTTGACTGATTTTGGGCTCTCCAAGGTTGGCCTTATCGACAGCACAGATGACTTATCGGCTCCATCATTTTCTTCTGATGGTTTCCTTGGAAATGATGAACCAAAGAATCGACACTCTTCAAAAGTGGAACAACGGCAAAAGCAGTCAGTAGTTGGAACCCCAGACTATTTGGCACCTGAGATACTTCTTGGCATGGGACATGGTACAACCGCAGATTGGTGGTCTGTGGGTGTTATACTTTATGAACTTCTTGTGGGTATTCCACCATTCAATGCAGAACATCCGCTGGTAGGTCTTTGTAATATTAAAATCCCCTACTTTCTAACAAGTCTAAAGAAATATATCAGATGA 3048 0.4281 MSSPPPPSRFSRSPPANLAEKNPTPETTLQHLKPSPVDTRSKLQKIPPIPSQRAAIAEEGESDDEVEDEGDGDDRELTEGAASSILLASTLGLNHIRTRSAPSPLRFPSLVGGTSSNLSKDAVKIHDGIDAKPNLKTSRLNVASMEPGKKIHMSQCKSSRVPSHFLPVLEGNNEAFAREMQSPRFQAILRVTSGRKKRKPEIKSYSHELNSKGVRAFPVWKNRAFWHMEEVMVAVRTKFEKLKEEVDSDLSAFAGDLVGILEKTSGSRPECKESLEDLLVVARQCAMMSPSDFWMKCESIVQNLDDKRQELPMGILKQAHTRLLFILTRCTRLVQFQKESGYEQDHILGLHQLSDLGVYPEQILQAAQQKSSVLSGGHEMTEKQLKKSHGKEEENLIIKQSHADQNVSSATDSVDVATAKSVDSCASSYRMSSWKKFPLPAEKKCKGQDAADVPSKSELDQMQVKDEHAENLDSLSCNPEHSEPSSRTQKVTWGFWGDHHNLTYEDSMICRICEVEIPIVHVEEHSQICTIADRCDLKGLTINERIERVAETIEKILESWTPKSTPKSTDAPGESFGFARVSMSSMHEEFNELSIERNSLSCRYTEDLLDPAPEADNTFVKDDLNLLPKISCETHACFKPDQGTKVSSPGSLTPRSPLLTPRTSQIEMLLSGQRTISELESYSQLSPCPPQGELKLMFGGLEKYVYLCGQIEDEKVDSSNGMVDEESSVEDDTIRSIRTSPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKNALGTKVLKKADMIRKNSVQSILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIDSTDDLSAPSFSSDGFLGNDEPKNRHSSKVEQRQKQSVVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGIPPFNAEHPLVGLCNIKIPYFLTSLKKYIR 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0127 1015 SUPERFAMILY Protein kinase-like (PK-like) 738 1001 IPR011009 -
Glsi14g0127 1015 Gene3D Transferase(Phosphotransferase) domain 1 845 994 - -
Glsi14g0127 1015 PANTHER SERINE/THREONINE-PROTEIN KINASE 455 994 - -
Glsi14g0127 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Glsi14g0127 1015 Pfam Protein kinase domain 755 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0127 1015 MobiDBLite consensus disorder prediction 1 76 - -
Glsi14g0127 1015 FunFam Probable serine/threonine-protein kinase cot-1 844 1010 - -
Glsi14g0127 1015 SMART serkin_6 755 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0127 1015 MobiDBLite consensus disorder prediction 15 37 - -
Glsi14g0127 1015 MobiDBLite consensus disorder prediction 465 488 - -
Glsi14g0127 1015 MobiDBLite consensus disorder prediction 370 393 - -
Glsi14g0127 1015 MobiDBLite consensus disorder prediction 60 75 - -
Glsi14g0127 1015 ProSiteProfiles Protein kinase domain profile. 755 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0127 1015 FunFam probable serine/threonine protein kinase IREH1 753 848 - -
Glsi14g0127 1015 Gene3D Phosphorylase Kinase; domain 1 753 844 - -
Glsi14g0127 1015 MobiDBLite consensus disorder prediction 923 946 - -
Glsi14g0127 1015 CDD STKc_MAST_like 761 994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0127 Glsi-ChrGlsi14 1740194 1754512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0127 43 1005 AGC Kinase Gene Family AT5G62310 57.741 0.0 1076
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Glsi14g0127 Pkinase 4e-54 CL0016