Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0103 ATGTCTCAAGACAGTTCAGACCCTTCTACTTGTTGCTTGAGATCGGATCATTTGGATGCAGCTTCAGCTGAACTGAAACTGTACCGAGCCTTCATCTTCTCTGTACCCATATTCTTCACTTTCATTTTGCTATTTTTGTTCTACGTCTTCTATCTTCGACCACGAAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCATTTCCAGGGGAAAATAGTGGTATCTCCAGGCAGCCTGAAATGGGCTTGAAGAAAGAACTGAGAGAGATGCTGCCAATTATTGTATACATGGAAAGCTTCTCAGTTAAAGATACACAATGCTCAGTATGCCTTCTGGACTACCAACCAGAGGACAGGCTTCAACAGATACCTGCATGCGGTCATACATTTCACATGAGCTGCATTGATCTTTGGCTCACCAACCACAGCACTTGTCCTCTCTGCCGCTTGTCCCTACTAGCTTCTGCTAAATCTTCAACTGAGACATCTAATATACAGAGGCCACTGGGTGATGAAGAAACTACAGCCACCCTATTCTCCGAATCAAGATCCACAAGGCGTCCAGATGCCAGTGTTGTCCAGAATTGCTCTGGAGATGTTGCAAGCAGCGCTCACTGCATTGATGTTGAAAGACAAAATGCAGAAAGCAGTTAA 651 0.4485 MSQDSSDPSTCCLRSDHLDAASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRAFPGENSGISRQPEMGLKKELREMLPIIVYMESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSTETSNIQRPLGDEETTATLFSESRSTRRPDASVVQNCSGDVASSAHCIDVERQNAESS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0103 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 153 IPR013083 -
Glsi14g0103 216 PANTHER OS11G0150450 PROTEIN 40 167 - -
Glsi14g0103 216 FunFam RING-H2 finger protein ATL7 72 153 - -
Glsi14g0103 216 SMART ring_2 106 147 IPR001841 -
Glsi14g0103 216 Pfam Ring finger domain 105 148 IPR001841 -
Glsi14g0103 216 CDD RING-H2_EL5-like 105 148 - -
Glsi14g0103 216 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Glsi14g0103 216 SUPERFAMILY RING/U-box 90 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0103 Glsi-ChrGlsi14 1324233 1341043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0103 22 215 C3H Transcription Factor Family AT4G10150 50.732 3.82e-62 192