Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0095 ATGGAACCCTCAAATTATCAAAATGCACCATTTTCTCCAAAAAATCTTATCCATGATTCATCATCCCCACCTTCAAATCAATTTGCCCCACAAGAAAAGAAGCATGAAGAATGGTCTTGGGAAGAGAACAAGGTATTTGAGAATGCGTTAGCAGAGATTGGGATTGAATCTGAAATCCTACTACCCACCCTTGCTTTGAGAATCCCAACCAAAAGCATCTCTCAATTTAAGGAGCATTTCAAGGCATTGGTGGATGATATCAGGATGATTGAGTCAGATTTTGATGAAATTCCGAACATTGGAGTCTTTGAAAAGAATAACTCAAACACAAGTCAAGTCAAGATTGAAGGTCCCAAAAGAGGAGAAACAAGATCTACCAATGGACGTAAAAGGGGAGCTCCATGGACCAAGACAGAACATGAGTTGTTTCTATTAGGGCTTGAACAGTATGGTAAAGGAGATTGGAAGAGCATATCGAGGTATGTGGTACTGACTAGGACCCCGGCTCAAGTTGCCAGCCATGCCCAGAAGTACTTTCTGAAACTTCAAAACCCTAATTCTCGTCGCAAAAATGGATCGGTCATGCGAACTGTGGAGGATTCGTGGTCTGCCAAAAATGCAGAAACTGTCTGTGGTGACCAGATCACTTCAGGTATTTTGATTGCAAAATATGGTTAA 678 0.413 MEPSNYQNAPFSPKNLIHDSSSPPSNQFAPQEKKHEEWSWEENKVFENALAEIGIESEILLPTLALRIPTKSISQFKEHFKALVDDIRMIESDFDEIPNIGVFEKNNSNTSQVKIEGPKRGETRSTNGRKRGAPWTKTEHELFLLGLEQYGKGDWKSISRYVVLTRTPAQVASHAQKYFLKLQNPNSRRKNGSVMRTVEDSWSAKNAETVCGDQITSGILIAKYG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0095 225 NCBIfam myb-like DNA-binding domain, SHAQKYF class 130 181 IPR006447 GO:0003677
Glsi14g0095 225 ProSiteProfiles SANT domain profile. 130 185 IPR017884 -
Glsi14g0095 225 FunFam transcription factor MYB1R1 133 184 - -
Glsi14g0095 225 MobiDBLite consensus disorder prediction 1 29 - -
Glsi14g0095 225 CDD SANT 134 179 IPR001005 -
Glsi14g0095 225 PANTHER TRANSCRIPTION FACTOR KUA1 33 202 - -
Glsi14g0095 225 MobiDBLite consensus disorder prediction 117 133 - -
Glsi14g0095 225 Gene3D - 133 184 - -
Glsi14g0095 225 SUPERFAMILY Homeodomain-like 129 184 IPR009057 -
Glsi14g0095 225 MobiDBLite consensus disorder prediction 1 36 - -
Glsi14g0095 225 Gene3D - 29 96 - -
Glsi14g0095 225 ProSiteProfiles Myb-like domain profile. 127 179 IPR001005 -
Glsi14g0095 225 Pfam Myb-like DNA-binding domain 134 179 IPR001005 -
Glsi14g0095 225 MobiDBLite consensus disorder prediction 112 133 - -
Glsi14g0095 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 183 IPR017930 -
Glsi14g0095 225 SMART sant 131 181 IPR001005 -
Glsi14g0095 225 SMART sant 34 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0095 Glsi-ChrGlsi14 1228203 1234444 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi14g0095 Myb_DNA-binding 5.3e-12 CL0123