Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0092 ATGGCTTCTTCCAATGGTGGAGTGCCCCCTGGGTTTCGGTTTCATCCAACGGATGAAGAGCTTCTTCATTATTACTTGAAGAAGAAGGTGTCCTTTCAGAAGTTTGACATGGAGGTCATTAGAGAAGTGGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAGGTGTAGAATTGGGTCAACACCACAAAACGAGTGGTTCTTCTTCAGTCACAAGGACAGGAAGTACCCAACAGGGTCAAGGACGAACAGAGCAACGACTGCTGGGTTTTGGAAGGCCACAGGGAGAGACAAGTGCATTAGGAACAGCTTCAAGAAAATTGGTATGAGGAAAACCCTTGTCTTCTACAGAGGCAGAGCTCCTCATGGCCAAAAGACTGACTGGATCATGCATGAATACCGCCTTGAGGATGCCGATGATCCTCAAGGAAATCCCAATGAAGATGGCTGGGTGGTTTGCAGGGTGTTCAAGAAGAAGAACCTATTCAAGATCGTCAATGAAGGTGGCTCCATGCATAATTCAGACCAACAACTCAATAATTCCTCTAGTATCAATCAACCTCGCTCCTTCATGCACAGAGAGAGCCAATACTTACTTCACCAACAACAAAACCCTAGAAACTCATCCGGGTTCGAGCTCGATAAACCGGAGCTTGCTCTTCACTATCCTCACTTGCAAAACCCTCAATACTCACTCTTCCAAGCTCAACCTCTTCTTCCAACTCACAAGCCCGTTGCTTATGACTATTCATATGCATCGACCCTGCCTTCAGACTCACCGGTCATAGCGAAGCAGCTCATGACAAACCCTAGAGACTGCGAGAGCGGTAGTGAGGGCTTGAGGTACCAAGTTTCGGAGCCCGGAATGGAAGTTGGCTCGTGTGAACCTGCTCAAGAGATGGGAACAGGAAGAGAAGATCAAGGAATGAATGAATGGGGCGTGCTTGATAGGCTCGTCACCTCTCATCTTGGAAATGAAGACTCCTCCAAAGGGGTTAGGTTTGAGGATGCAAATGCACAATCTGTTCACCAGATCAACCAGCTGTCGCTACGTGGAGAAATGGACTTTTGGGGCTATGGAAAATAA 1089 0.4738 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMEVIREVDLNKMEPWDLQERCRIGSTPQNEWFFFSHKDRKYPTGSRTNRATTAGFWKATGRDKCIRNSFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLEDADDPQGNPNEDGWVVCRVFKKKNLFKIVNEGGSMHNSDQQLNNSSSINQPRSFMHRESQYLLHQQQNPRNSSGFELDKPELALHYPHLQNPQYSLFQAQPLLPTHKPVAYDYSYASTLPSDSPVIAKQLMTNPRDCESGSEGLRYQVSEPGMEVGSCEPAQEMGTGREDQGMNEWGVLDRLVTSHLGNEDSSKGVRFEDANAQSVHQINQLSLRGEMDFWGYGK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0092 362 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Glsi14g0092 362 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Glsi14g0092 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 207 - -
Glsi14g0092 362 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Glsi14g0092 362 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Glsi14g0092 362 FunFam NAC domain-containing protein 17 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0092 Glsi-ChrGlsi14 1184859 1188398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0092 1 359 NAC Transcription Factor Family AT1G33280 56.438 1.87e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g0092 NAM 9.8e-37 No_clan