Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0014 ATGCCATGTATCGAATGGGTCGCCACCCAGCTACAGAGTGTCGAAAAGCATTATTCCGTTTACGGGACAGATCAAGTGGGGAGTGGAGGATACGGTAAGATGTCAATTCGTAATAATCAATCAGCAATCTGTCCTACCATGGCAATCCTCCTCGCTTTGCTTTTTCTCGGATTCTTCTCAGCTGAAATTCATGTCATCTTCTCTTTTACTGACCCTCAAGATGTTACTGTACTCAGATCTTTAAAGGATATATGGCAAAACACACCACCCAGCTGGGACAAATCAGACGACCCTTGTGGAGCACCTTGGGAAGGAGTGACTTGCAACAAATCAAGGGTTACTTCACTGGGATTGTCAACCATGGGCCTCAAAGGTAAACTAAGTGGAGACATTGGGGGACTCACTGAATTGAGATCATTGGACTTATCATTTAACAGAGGTTTGACAGGTTCTCTCTCTCCACAGTTAGGAGACCTAAGAAAGCTAAATATTTTGATTTTGGCCGGTTGCAGCTTCGATGGCAAAATTCCAGATGAATTGGGAAATCTTTCAGAGCTATCTTTCTTGGCGTTGAATTCAAACAACTTCTCTGGACAAATACCTCCTTCATTGGGTAAACTTTCCAAATTATACTGGTTGGACTTAGCAGACAATCAGTTATCAGGGACAATCCCTGTTTCGACTTCCACTACACCTGGATTAGACCTCCTTTCAAAGGCCAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGTTCCATTCCACCCAAACTTTTCAGCTCTAAGATGGTACTCATACATGGATTATTTGATGGAAATCATTTTATGGGGACTATACCATCAACTCTAGGACTAGTTCAGACACTTGAAGTTCTTCGGCTTGATAGAAACTCATTGACAGGAGAGGTCCCATCAAATCTCAATAACCTTACTAACATCAATGAATTGAATTTAGCCCATAATAATTTGACAGGCCATTTGCCAGACTTAACTCAGATGGATACACTGAATTATGTGGATCTGAGCAACAATTCTTTTGATCCATCAGAAGCTCCAACTTGGTTCACAACTTTACCATCACTTACAACTCTAATTATGGAGTTTGGGTCACTTCAAGGTCCTCTGCCATCAAAACTCTTCAGCATTCCCCAAATACAGCAAGTGAAACTAAGGCACAATGCATTGAACAACACTTTGGATATGGGTGACAGCATTAGCCCCCAATTGCAGCTTGTAGATTTACAAGACAACCAGATTACCTCAGTAACACTCAGTTCTGGATACAAAAATACATTGATTCTTCTAGGAAATCCAGTGTGCCTTACTGCTCTCTCAAATACTAATTACTGCCAACTTCAGCAACAGCCTAAAAAACCCTACTCCACCAGCTTGGCTAATTGTGGAAGCCAATCTTGTCCCCTTGATCAGAAGCTCAGCCCACAAAGTTGCGAATGTGCCTATCCATATGAAGGAATGCTGTATTTCAGAGGACCCTTGTTCAGAGAATTGTCAAATGTCAATACATTCCATTCACTTGAAATGAGCCTATGGGTGAAGCTGGGTCTCACTCCTGGCTCAGTTTCTTTACAAAACCCATTTTTCAATAGTGATGATTATCTTCAAGTGCAACTGGCACTCTTTCCACCGACAGGAACATACTTTAATAGGTCAGAGATTCAAAGAATTGGGTTTGAATTGAGTAATCAAACGTACAAGCCTCCACCAGAGTTTGGACCCTATTACTTTATTGCATTTCCTTATGCTTTCCCAGCCTCCCACGGAGCAACTTCTCTAAGCAGGGGTGTCGTCATTGGGATAACAATTAGCTGCTCATTTCTGATTCTGAGCCTCGTTGGATTAGGGATATATGCAATTGTGCAGAAGAAGCGTGCAGAGAAAGCCATTGGGTTAAGTAGACCTTTTGCGTCTTGGACACCAAGCGGCAAGGATAGTGGAGGTGCACCACAACTAAAGGGAGCAAGATGGTTCTCTTACGATGAACTCAAAAAGTGCACCAGTAATTTCTCTGACAGCAATGAGTTGGGATTTGGAGGTTATGGCAAGGTCTACAAAGGCATGCTCCCTGATGGACAAATGGTTGCAATCAAACGAGCTCAGCAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAGTTGCTCTCACGAGTTCACCACAAAAATCTTGTTGGTCTTGTGGGCTTCTGCTTTGAACAAGGAGAACAGATGTTGGTTTACGAATTTATGCCCAATGGAACACTTAGGGAGAGTTTATCAGGGAGATCTGGCATTTATCTTGACTGGAAGAGGAGGCTCCGTATTGCTCTTGGCTCAGCTAGAGGACTTGCTTACTTACATGAACTAGCCAATCCTCCCATAATTCATAGAGATGTGAAATCGACTAATATATTGCTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGCTTGTCTAAGCTAGTATCGGACAGTGGAAAAGGGCACGTTTCAACTCAGGTTAAAGGCACATTGGGTTATCTGGATCCTGAATATTACATGACCCAGCAACTTACTGAGAAGAGCGATGTGTACAGTTTTGGTGTGGTTATGCTTGAACTGATAACTGCGAGGCAACCTATAGAGAAAGGAAAGTACATAGTCCGCGAAGTGCGCTTATTGATAAATAAGAATGATGAAGAGCATTATGGGTTAAGGGAACTCATGGATCCAGTGGTTAGAAACAGTAGTAATCTTGTAGGGTTCGGGAGATTCTTGGAGCTGACAATACAGTGCGTTGAGGAATCAGCTGCAGACCGTCCAACAATGAGTGAAGTTGTAAAAGCACTCGAAAACATTTTACAGAATGATGGGGTGAATACGAACTCCACTTCTGCATCCTCATCAGCAACAGACTTTGGAGTTTCCAAGGGTGCTACCAGACATCCTTACATTGATACTTTGACCAGAAAGGAGATTAACGAGAGCAATGCCTTTGATTATAGCGGGGGCTACACACTTTCGGCAAAAATCGAACCCAAATAG 3030 0.4254 MPCIEWVATQLQSVEKHYSVYGTDQVGSGGYGKMSIRNNQSAICPTMAILLALLFLGFFSAEIHVIFSFTDPQDVTVLRSLKDIWQNTPPSWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGGLTELRSLDLSFNRGLTGSLSPQLGDLRKLNILILAGCSFDGKIPDELGNLSELSFLALNSNNFSGQIPPSLGKLSKLYWLDLADNQLSGTIPVSTSTTPGLDLLSKAKHFHFNKNQLSGSIPPKLFSSKMVLIHGLFDGNHFMGTIPSTLGLVQTLEVLRLDRNSLTGEVPSNLNNLTNINELNLAHNNLTGHLPDLTQMDTLNYVDLSNNSFDPSEAPTWFTTLPSLTTLIMEFGSLQGPLPSKLFSIPQIQQVKLRHNALNNTLDMGDSISPQLQLVDLQDNQITSVTLSSGYKNTLILLGNPVCLTALSNTNYCQLQQQPKKPYSTSLANCGSQSCPLDQKLSPQSCECAYPYEGMLYFRGPLFRELSNVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGTYFNRSEIQRIGFELSNQTYKPPPEFGPYYFIAFPYAFPASHGATSLSRGVVIGITISCSFLILSLVGLGIYAIVQKKRAEKAIGLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSNFSDSNELGFGGYGKVYKGMLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSGIYLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYIVREVRLLINKNDEEHYGLRELMDPVVRNSSNLVGFGRFLELTIQCVEESAADRPTMSEVVKALENILQNDGVNTNSTSASSSATDFGVSKGATRHPYIDTLTRKEINESNAFDYSGGYTLSAKIEPK 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0014 1009 PANTHER RECEPTOR-LIKE PROTEIN 55 79 948 - -
Glsi14g0014 1009 Pfam Leucine rich repeat N-terminal domain 72 109 IPR013210 -
Glsi14g0014 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Glsi14g0014 1009 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 751 962 - -
Glsi14g0014 1009 SMART serkin_6 675 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0014 1009 FunFam Predicted protein 232 453 - -
Glsi14g0014 1009 CDD STKc_IRAK 681 948 - -
Glsi14g0014 1009 ProSiteProfiles Protein kinase domain profile. 675 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0014 1009 Gene3D Ribonuclease Inhibitor 74 230 IPR032675 -
Glsi14g0014 1009 Gene3D Ribonuclease Inhibitor 332 446 IPR032675 -
Glsi14g0014 1009 SUPERFAMILY L domain-like 333 439 - -
Glsi14g0014 1009 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Glsi14g0014 1009 FunFam Leucine-rich repeat protein kinase family protein 643 750 - -
Glsi14g0014 1009 Gene3D Transferase(Phosphotransferase) domain 1 751 971 - -
Glsi14g0014 1009 Gene3D Ribonuclease Inhibitor 231 331 IPR032675 -
Glsi14g0014 1009 Gene3D Phosphorylase Kinase; domain 1 649 750 - -
Glsi14g0014 1009 Pfam Protein tyrosine and serine/threonine kinase 679 945 IPR001245 GO:0004672|GO:0006468
Glsi14g0014 1009 SUPERFAMILY L domain-like 70 346 - -
Glsi14g0014 1009 FunFam Leucine-rich repeat family protein 73 229 - -
Glsi14g0014 1009 SUPERFAMILY Protein kinase-like (PK-like) 660 958 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0014 Glsi-ChrGlsi14 261733 268520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0014 51 1009 Receptor kinase-like Gene Family AT1G79620 73.131 0.0 1469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi14g0014 PK_Tyr_Ser-Thr 1.2e-46 CL0016