Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0011 ATGATGAACATGGTACGAGAACGACGGATTCGAATTTTCTGTAATACTTTCGATAGTGGAATAGGTGAAATCCGGAATGTGTATCTACCAGAGAGTCTATGCCTTCAAAATTTCATTTTGTTCTTCATTTTGAGAACCCAATTCTCAGCTCTTGATGATCTTCTGTTGGTTTCCAAGCATTTCCATGTTCCTTCGAAAGCCCTGTTCCCACTTGCAACACCCTTTTCTATTCTTCCCTACAATTTGCTCTCTGAATTTTCGGTTCCAGTCGAGGAAGTCAGGTCGAAAATCAGCTATCAGATCCTTCGTGAGCGGCATTCCAGTTATCCTTGTCTTGGATTGACCATTTTGCCCCTACACTTCGTCCTAATGGCCAACAGTCCCCTTTTCTTCCTGCGGTTCTTTGCAATCCTGTTATCGGTTTCCTACTCTATTTTCCCGCCTTGTATGGCCCGAACGGTGGAAACCCAGGCACTCCTTCAGTTCAAGAACCATTTGAAGGACCCTTTGTATTATTTGGGTTCATGGAAAGAACTAGACTCTCCATGTGAATTCCATGGAGTCACTTGTGATCCAGTTTCTGGAAAAGTCTCAGAAATCTCACTGGAAAATAAGTCCCTCTCGGGGGATATTTTCCCATCAATTTCTGTCCTCCAGAGCCTGAAAGTTTTGTCACTCCCATCAAATATGATTTCTGGGAAGCTTCCATATGAAATAATCAACTGTAGCAATCTCAGAGTTTTGAATCTAACAGGAAATCAGATGGTTGGAACTATTCCAGACTTCTCTGGGCTGAGAAATCTGAAGGTTCTTGACCTCTCAGCAAACTACTTTTCTGGCTACTTGCCGGGCTGGGTGGGAAATCTAACTGGTCTAGTTTCACTGGGACTTGGGGAAAATGAATATACTGAGGGTGAAATTCCAGAGATTCTTGGCAATCTGAAGAACTTAACTTGGCTCTACCTTGGTGGCTCCCACTTGAAAGGAGAGATTCCAGAATCCATTTATGAAATGAAGGCATTGGAGACACTGGATATTTCAAGAAACAAGATCTCTGGAAAACTCTCCAAGTCAATTGCTAAGTTAAGAAATCTTAACAAGATTGAGCTATTTTCAAATAATTTAACTGGACAAATTCCAGCTGAGCTAGCAAACCTGACCAACCTGCAGGAAATTGACATTTCTATGAACAATATGTATGGAAGGTTGCCAGAGTTGATTGGTAACATGAAAAACTTGGTAGTTTTTCAACTATATGAAAACAACTTTTCTGGAGAACTTCCTGCTGGGTTTGGAGACATGCAGCATCTTATTGGGTTCTCAATCTATCGAAACAGCTTCACTGGGATAATTCCAGAAAATTTTGGCCAATTTTCACCACTTGAGAGTATTGACATATCTGAGAATCAATTTTCAGGTAATTTCCCAAAGTTCTTGTGTGAAAACAGGAAGTTGAGATTTTTGCTTGCTTTGGAAAACAATTTCTCAGGGGAGTTGCCTGAATCTTATATTACATGCAAATCTCTGGAGAGATTTAGGATCAGCAGGAACCGCTTGTCTGGAAGAATCCCAAATGAGCTTTGGGCACTTCCATATGTAAAAATAATTGATTTGGCTTATAATAGTTTTAGTGGTGAAATTTCTCCAGAAATTGGGTTTTCTGCCAGCTTAAGTCAGTTAGTTTTGATGAAGAACAGGTTTTCAGGTAACATTCCATCAGAACTTGGCAAGCTGATAAACTTGGAAAAGCTTTATTTGAGCAACAACAATTTCTCTGGTGATATACCACCTGAAGTTGGAGCTCTGAAGCAGCTATCCTCTTTGCATCTAGAAGAAAATTCATTAACCGGATTGATACCAGCAGAACTGGGTAATTGTGCAAGGCTGGTGGACTTGAATCTTGGTTGGAATTCTCTAACTGGCAATATTCCCCAGTCAGTTTCACTTATGAGCTCGTTGAACTCTCTTAATCTATCTGGAAACGAGCTTACAGGTTCTATTCCGAAAAGTTTAGTGTCAATAAAACTAAGCTCAATTGATTTTTCTGGAAACCATTTTTCTGGGAGAATTCCATCTGACCTTCTAATTATTGGTGGAGACAAAGCTTTTCTTGGAAACAAGGGACTTTGTGTTGACAAAGATTCAAAAACTCTCATGAATTCTGAATTGAACATTTGTGCAAGAATTCCTGGTCAGAAAAAGGTCTTTGCTGATAAATTTGACTTACTCTGTATTATTGCTTCCATCTTGGTTGTAGTTTTGGCTGGGCTGCTGCTTGTGAGTTATGGAAGCTTGAAGCACGGAGAAGCAGATGTAGAGAAGAACTTACAAAGTCAAAAGGAAGTAGATCCAAAATGGAAAATTGCATCTTTCCACCAATTCGATATTGATGTGGATGAAATATGTAATTTGGATGAAGATCATTTAATTGGAACTGGTGGTACAGGAAGGGTTTATCGAGTGGAGTTGAGAAAAAACAGTGCCATGGTGGCTGTAAAACAACTGTGGAAAGGAGATGGTGTAAAAATTTTGGCCGCAGAGATGGAGATTTTGGGGAAAATTAGGCACAGAAATATACTTAAACTTTATGCTTCTTTACTTAAAGGAGGATCAAACTTCTTAGTGTTAGAGTACATGCCGAATGGTAATCTTTTTCATGCTCTTCACAGAGAGATAAAAGGGGGGAAGCCAGAACTGGATTGGTACCAGAGGTACAAAATTGCACTGGGAACTGCAAAAGGAATTGCCTATTTACATCACGATTGCTCTCCACCTGTTATTCATAGAGATATAAAATCCAGCAACATTTTGCTTGATGAGAACTATGAGCCAAAAATTGCTGATTTTGGTGTTGCAAAGTTTGCTGAAAAATCTGATAAGCAGTTAGGTTGTAGCTGTATTGCTGGCACACATGGTTATATTGCTCCAGAGCTTGCTTATACACTAGAAGTCACTGAAAAGAGTGATGTATATAGCTTTGGAGTAGTGCTATTAGAATTAGTTACTGGGAGGGAACCCATTGAAGAGGATTATGGAGAAGGCAAGGATCTTGTATATTGGGTTATGACTCATCTCAATGACCGTAAAAGTGCTGTCAACATTCTTGATGATAAAGTGGCATCTGAGTCTGTTGAAGATGACATGATAAAGGTCTTGAAGGTTGCAATCCACTGCACTACGAAGCTTCCATCTTTGCGCCCTACCATGAGAGAGGTTGTCAAGATGCTTATTGATGCTGATTCTTGCACATTTCAATCTCCAGACTACGATTTTGAGAAAGATAGGAAGGGTTTTGTCTAG 3300 0.3976 MMNMVRERRIRIFCNTFDSGIGEIRNVYLPESLCLQNFILFFILRTQFSALDDLLLVSKHFHVPSKALFPLATPFSILPYNLLSEFSVPVEEVRSKISYQILRERHSSYPCLGLTILPLHFVLMANSPLFFLRFFAILLSVSYSIFPPCMARTVETQALLQFKNHLKDPLYYLGSWKELDSPCEFHGVTCDPVSGKVSEISLENKSLSGDIFPSISVLQSLKVLSLPSNMISGKLPYEIINCSNLRVLNLTGNQMVGTIPDFSGLRNLKVLDLSANYFSGYLPGWVGNLTGLVSLGLGENEYTEGEIPEILGNLKNLTWLYLGGSHLKGEIPESIYEMKALETLDISRNKISGKLSKSIAKLRNLNKIELFSNNLTGQIPAELANLTNLQEIDISMNNMYGRLPELIGNMKNLVVFQLYENNFSGELPAGFGDMQHLIGFSIYRNSFTGIIPENFGQFSPLESIDISENQFSGNFPKFLCENRKLRFLLALENNFSGELPESYITCKSLERFRISRNRLSGRIPNELWALPYVKIIDLAYNSFSGEISPEIGFSASLSQLVLMKNRFSGNIPSELGKLINLEKLYLSNNNFSGDIPPEVGALKQLSSLHLEENSLTGLIPAELGNCARLVDLNLGWNSLTGNIPQSVSLMSSLNSLNLSGNELTGSIPKSLVSIKLSSIDFSGNHFSGRIPSDLLIIGGDKAFLGNKGLCVDKDSKTLMNSELNICARIPGQKKVFADKFDLLCIIASILVVVLAGLLLVSYGSLKHGEADVEKNLQSQKEVDPKWKIASFHQFDIDVDEICNLDEDHLIGTGGTGRVYRVELRKNSAMVAVKQLWKGDGVKILAAEMEILGKIRHRNILKLYASLLKGGSNFLVLEYMPNGNLFHALHREIKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPVIHRDIKSSNILLDENYEPKIADFGVAKFAEKSDKQLGCSCIAGTHGYIAPELAYTLEVTEKSDVYSFGVVLLELVTGREPIEEDYGEGKDLVYWVMTHLNDRKSAVNILDDKVASESVEDDMIKVLKVAIHCTTKLPSLRPTMREVVKMLIDADSCTFQSPDYDFEKDRKGFV 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0011 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 879 1093 - -
Glsi14g0011 1099 ProSiteProfiles Protein kinase domain profile. 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0011 1099 FunFam Receptor-like protein kinase HSL1 416 719 - -
Glsi14g0011 1099 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0011 1099 SUPERFAMILY L domain-like 150 477 - -
Glsi14g0011 1099 SMART serkin_6 804 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0011 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Glsi14g0011 1099 Gene3D Ribonuclease Inhibitor 302 363 IPR032675 -
Glsi14g0011 1099 Gene3D Ribonuclease Inhibitor 364 436 IPR032675 -
Glsi14g0011 1099 ProSitePatterns Protein kinases ATP-binding region signature. 810 833 IPR017441 GO:0005524
Glsi14g0011 1099 Gene3D Ribonuclease Inhibitor 152 301 IPR032675 -
Glsi14g0011 1099 CDD STKc_IRAK 810 1076 - -
Glsi14g0011 1099 PANTHER RECEPTOR-LIKE PROTEIN 55 484 1076 - -
Glsi14g0011 1099 FunFam Leucine-rich repeat receptor protein kinase EMS1 331 415 - -
Glsi14g0011 1099 FunFam Probable inactive receptor kinase RLK902 152 311 - -
Glsi14g0011 1099 Pfam Leucine rich repeat N-terminal domain 155 191 IPR013210 -
Glsi14g0011 1099 Gene3D Transferase(Phosphotransferase) domain 1 883 1091 - -
Glsi14g0011 1099 Gene3D Ribonuclease Inhibitor 437 720 IPR032675 -
Glsi14g0011 1099 FunFam Leucine-rich receptor-like protein kinase family protein 794 878 - -
Glsi14g0011 1099 SUPERFAMILY Protein kinase-like (PK-like) 797 1076 IPR011009 -
Glsi14g0011 1099 SUPERFAMILY L domain-like 368 694 - -
Glsi14g0011 1099 Gene3D Phosphorylase Kinase; domain 1 803 882 - -
Glsi14g0011 1099 ProSiteProfiles Leucine-rich repeat profile. 244 266 IPR001611 GO:0005515
Glsi14g0011 1099 Pfam Leucine Rich Repeat 341 362 IPR001611 GO:0005515
Glsi14g0011 1099 SMART LRR_typ_2 578 601 IPR003591 -
Glsi14g0011 1099 SMART LRR_typ_2 650 674 IPR003591 -
Glsi14g0011 1099 SMART LRR_typ_2 265 288 IPR003591 -
Glsi14g0011 1099 SMART LRR_typ_2 386 410 IPR003591 -
Glsi14g0011 1099 SMART LRR_typ_2 602 625 IPR003591 -
Glsi14g0011 1099 SMART LRR_typ_2 314 338 IPR003591 -
Glsi14g0011 1099 Pfam Leucine rich repeat 580 639 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0011 Glsi-ChrGlsi14 220172 226093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0011 145 1088 Receptor kinase-like Gene Family AT1G72180 59.034 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0011 Pkinase 8.2e-48 CL0016