LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi13g2004	ATGGACAACATTCACACATACACGCCTACACCTGCCAGGTCCTTCAGCTTCTCTAGAATTGTTCGAGACAAAGAGTCTGATGCAATTGTTAATGACCGACATGGGGAAGCAGGAGAGTCACTTCTCCACAATGACCCTTCCTTCACTCTCCCTCAACTCTTGGAAGAATTGGATCGCTTTCTTTGCGCTCTCCAATCCAACCCCCCTCCTCCTCCTCCTCAGCTTCCAGACTGCATTTTCTTATTGCCCAAATTTTTGGATTCTGTGATCGATAAATATAACGGGGGCAAATACAGAACCAAATTTGGGCAAGCCCCAGTTGAGGACACCTCGTTTTTGGAAGCCTTGGATCTTATCTCGAAGCTTTCCACCACTTTGGGCGACTTCCCTTATTCCAACTCCCAAGCATCCTCTGCCCTAGACAAGACTAGCTCCGTCCTAGAAAAAGCCATGTCTTTCCTAGCCAAAGAGCTCTGCACTCTCTTGAAAAATACCAAATCCAACGACTCTGATCTTCAATCTAAAACGCCCAAGAAAATGACGAAACACTCATCATCCTTTAATTCTCTTCAAGACACCGATTTGGGTGTCATACACGAACATGAATCCCCCTCCGCCACCCCAGATCAGGAGGAATTTCCAGCTTTTTCTCCAGAGACAGTGTCCAATATGAACAAGATCACCACTGCCATGATTACTGCGGGATACCAGATAGAGTGTTGCATGGCATTTAGCAATTTTAGACGCAACGCTTTCAAAACTGTATTGCAGAGCTTTGGGTATGTGAGCATAAGCATGGAAGACATTCAAAGAACGCAATGGGAGTCATTGGAAGGGCAAATTGGGACGTGGATCAACGTGGTTCGGCATTGCTCCATTGTGCTCTTCTCGGCTGAACGAAGGTTCTATGACTCTGTCTTCCCAGATCAACCATCCATAGCTCACAGATTATTCGGTGATCTTGCAAGGGCTGTCATCATTCGATTCTTGAATTTTGCAGAGGCCATCGCTTTAACAAAGCGCTCAGTGGAGAAACTGTTTAAATTTCTGGATATGTACGAGACGCTTCGAGATTTGGAGGGGAGCATGGAGGAGTGGTATGAGGAAATTGGGTGCGGGCAAGAGCTGGCATACGAGACAGCGACGACAAAGGGAAGGGTGGGGGAGGCGGTGGCGAGAATGTTCTTCTGTGAATTGGAAAACTCCATAAAGAGCGATAACGAAAGAAACGCAGTACCAAATGGAGCAGTTCACCCTCTGACGCGGTATGTGATGAACTATCTTGAATACTTATGCGAGTATAAAGATACAATGGAGCAAGTGATTGAGAAATGGAATCCGGAGGTAGTGGTGCAGATGCCAGGAGATCATCAGGTGGAGGAAGAGGGAATGCCAAAGAACTCATCCGCATTTGCAGTACAGTTAATGAGAGTGATGGAGTTGCTGGATGGGAATGTTGAGATGAAGTCCAAGGTGTATAGGGACGAAGGATTACGATACATATTTCTAATGAATAATGGGAGATACATAGTGCAGAAGACAAAAGGGTCGAAGGAGATTCGCGAATGTATGGGTGACAATTGGTGCAGGAGGAGGCAATCGAGACTGAGGCTATACCATAAGAATTATCAGAGGGAGACGTGGGGGAAGGTGCTGCAGTGCCTTAGCCATGGGGGTTCGCAGGGGAATGAGAAGGTGATAAAAGCGTCAGTGAAGGAGAGGTTTAAAAGCTTCAATGCCATGTTTGAGGAGATACACAAGACGCAGAGTAGTTGGGTGGTGAGCGATGAGCAGCTTCGGTCGGAGCTTCGAGTATCAATATCGGCGTTGATGATTCCAGCCTATCGCTCCTTTTGGGGAAGGTTCAAACACTATCTAGATTCAAGTAAACAGATGGAAAAGTATATCAAATACCAACCTGAAGACATTGAGATCCTTGTTGACAAACTCTTTAATGGGAATGCTACCTCCATGGCTAGAAGGAGAGCGTGA	1992	0.4629	MDNIHTYTPTPARSFSFSRIVRDKESDAIVNDRHGEAGESLLHNDPSFTLPQLLEELDRFLCALQSNPPPPPPQLPDCIFLLPKFLDSVIDKYNGGKYRTKFGQAPVEDTSFLEALDLISKLSTTLGDFPYSNSQASSALDKTSSVLEKAMSFLAKELCTLLKNTKSNDSDLQSKTPKKMTKHSSSFNSLQDTDLGVIHEHESPSATPDQEEFPAFSPETVSNMNKITTAMITAGYQIECCMAFSNFRRNAFKTVLQSFGYVSISMEDIQRTQWESLEGQIGTWINVVRHCSIVLFSAERRFYDSVFPDQPSIAHRLFGDLARAVIIRFLNFAEAIALTKRSVEKLFKFLDMYETLRDLEGSMEEWYEEIGCGQELAYETATTKGRVGEAVARMFFCELENSIKSDNERNAVPNGAVHPLTRYVMNYLEYLCEYKDTMEQVIEKWNPEVVVQMPGDHQVEEEGMPKNSSAFAVQLMRVMELLDGNVEMKSKVYRDEGLRYIFLMNNGRYIVQKTKGSKEIRECMGDNWCRRRQSRLRLYHKNYQRETWGKVLQCLSHGGSQGNEKVIKASVKERFKSFNAMFEEIHKTQSSWVVSDEQLRSELRVSISALMIPAYRSFWGRFKHYLDSSKQMEKYIKYQPEDIEILVDKLFNGNATSMARRRA	663

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi13g2004	663	Pfam	Exo70 exocyst complex subunit	283	647	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Glsi13g2004	663	Gene3D	Exocyst complex component Exo70	103	661	-	-
	Glsi13g2004	663	MobiDBLite	consensus disorder prediction	168	188	-	-
	Glsi13g2004	663	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	102	653	IPR004140	GO:0000145\|GO:0006887
	Glsi13g2004	663	SUPERFAMILY	Cullin repeat-like	89	651	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi13g2004	Glsi-ChrGlsi13	35482197	35484188	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi13g2004	50	662	EXO70 exocyst subunit family	AT5G13150	49.436	0.0	580