Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1991 ATGATGAACGGAAGGAACAGGTTTCCCTTTACTCCATCCCAGTGGCAAGAGCTCGAACATCAAGCTCTTATTTTCAAGTACATGGCTTCAGGCATCCCCATCCCACCAGATCTTCTCTTCACTATCAAAAGGAGCTACCTGGACTCTCCACTGTCTTCAAAGCTTCTATCGCACCAACCTCAACACTTTGGGTGGAACTATTTGCAGATGGGTTTGGGAAGAAAAATAGACCCAGAACCAGGGAGATGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCAAAAGAGGCATATCCAGATTCAAAATACTGTGAGAGACACATGCACAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCCACAAACACAAATCCCTCAACACCCACCATCTCATCAATCACGAAAAATACCCCAACAACTCATTCTCTCTCACCTCTCCCCTCAGTGTCCTCTCAACATTCTTGCTATGGTTCCCATCTTCAGCACTCCTTCCCTTATCATCACCCACCTTCAAGGTCATCTGGGATTGCTTTGTCATTTCAAGACAATAGTGCTCCCTTGTTTCTCGACACTGCCTCTCACTCTCAGACTAACACCGACTACAGGTACTTCTATGAACTGAAAGGGGAGGTGGATGAGCATGCTTTCTTCACAGAACCTTCTGGGAGTATGAGGAGCTTCTCTGCTTCATCTATGGATGATTCTTGGCAGTTCACTCCACTGACGAGGAGTTCCTCATCTTGTTCAAAACAGAGGAGTGGTTCTGGTTTATGCAACGAGTACTCTTACTTACAGCTTCAGAGCCTTGGTGACAACACAAAACAACCAGAGCAAGATCAGGGTTGCTATATATTGGGTAGTGATCTCAAATGTGAAACGCCCATCAAATTGGGGAAAGAAGAACCTCAGAAGACCGTTCACCGCTTCTTTGACGAATGGCCCCCCAAAAGCAGAGACTCATGGCTTGATTTGGATGATAAATCATCCACAACCCAACTATCAATTTCCATTCCCACATCTGCTCACGATTTTCCAGCTTTTAATTCCAGAACCCACCGCGTTGAAATGGATTTGAGTCGCCATGGAGGAATCCAATGTGTAGTGTTGTATGCTATTGCTTTCATAGTTCTGTTGTTTCTACCAAACAAACTCAGTGGCTCCGCCCAATCTGTTTTATGGTTGAGCTGA 1206 0.4511 MMNGRNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLLFTIKRSYLDSPLSSKLLSHQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTNTNPSTPTISSITKNTPTTHSLSPLPSVSSQHSCYGSHLQHSFPYHHPPSRSSGIALSFQDNSAPLFLDTASHSQTNTDYRYFYELKGEVDEHAFFTEPSGSMRSFSASSMDDSWQFTPLTRSSSSCSKQRSGSGLCNEYSYLQLQSLGDNTKQPEQDQGCYILGSDLKCETPIKLGKEEPQKTVHRFFDEWPPKSRDSWLDLDDKSSTTQLSISIPTSAHDFPAFNSRTHRVEMDLSRHGGIQCVVLYAIAFIVLLFLPNKLSGSAQSVLWLS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1991 401 MobiDBLite consensus disorder prediction 123 156 - -
Glsi13g1991 401 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi13g1991 401 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi13g1991 401 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Glsi13g1991 401 Pfam WRC 78 120 IPR014977 -
Glsi13g1991 401 PANTHER GROWTH-REGULATING FACTOR 5 8 349 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi13g1991 401 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1991 Glsi-ChrGlsi13 35326972 35328666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1991 7 236 GRF Transcription Factor Family AT3G13960 44.245 2.28e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi13g1991 WRC 8.7e-21 No_clan