Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1977 ATGATACGGTTTCGTGGAGTTTTCAATGGGATTTATTCGCTGGTGCTACTTACCTTATTCTACCATCAGAAATTTTTTTTGAGAGGTCTGTTTTTAGGGGATTTGCCTTCGGTTCCTCGGAGCTCTAGAGGCGGCAATTTCGACAGATGGAGTGGTGGTTTTAAGGTGACTCAACGGAAAATGGCAGAAGTTAATATCAATCCGACCAATTATAGTTCTGTCGTTGTTTCCTCAGTTTCACATAATGATAATATGACGATGAATGATCCTAAAGTTTGCGACGGTTTGTTTGCACACGAGGGTTACAGCAACCATTGCGAATACTTGATTGCAAATCCGCAGTGTAATTCAGGAGGGTTTTTCAATTATATTGCATTCTTATACTGCGATTGTAAAAATGTTAGTTTTTTGGGGTATGCTGTTTTGTTTTTATGGTTGGCTGCTCTGTTCTATTTGCTGGGTAATACTGCTGCCGACTACTTCTGTTGTTCTTTAGAGAAGCTTTCCAGTCTCTTGAAGTTGCCAGCGACTGTTTCTGGGGTTTCTCTGCTTCCACTTGGCAATGGAGCTCCAGATGTGTTTGCCAGCATTGCTGCTTTTATGAGTGAGGATGCTGGTGAAGTGGGTCTCAATAGTGTGTTGGGCGGAGCTATCTTTGTTAGTTGTATAGTTGTTGGGGCTATTTCTCTCTGTGTTTCAGATAGGAGGGTTCAGATTGATAGGAAGTGCTTCATTAGAGATATATGTTTCTTTCTTTTCACTCTTGTGTCCCTGGCAATCATTTTAATTGTTGGCAAGGTAACTATTGGCGGTGCTATAGCATTCATTTCAATCTACCTGGTGTATGCAATTGCAGTTGCTGCAAATGAGGTTTTAAGGAAACATGCTCAGAAATTCAAGTTGGATGCTGTAACGCCTTTGCTTCCTGTGAGGGGAAGTGTATTTTCTCATGTAAGCGAAGAGGATGAACCCATGCATTTGTCCCTACTTGAGACAGCGTCAGATAGTGAAGTGCCACTTCTTCAAAGTAAGTTACCTCAATGGATGTGGGCCTCTAATGTAGCAATTTATTCAAATCATGGAGTGAAGGATAGTCCAGAGGGCCTCAAGTTTTTATGGGGATGGAATGATGAGGAAACAGCAAATGAACACTCTTATTACTCATATATTAGACTTTTGTGGCTGCTGGAAGTGCCATTAACAGTCCCAAGAAGATTAACAATACCCATTGTTGAGGAGGAGCGCTGGTCGAAAGGTTATGCTGTTGCAAGTGCTTCATTTGCACCCATACTGCTAGCATTTTTATGGAATACCCAAGATGACGTGACTTCTTCTAGTGGTACAATTGTTTATGTTACCAGTGGTGGCGTAGGCGGTGTGCTTGGTATTGTTGCATTTCTATTCACCAGATCTGATCGACCACCTCAGAAATTTCTATTACCATGGGTTTTTGCTGGATTTCTTATGAGCATTGTTTGGTTCTACATCATTGCAACGGAGCTAGTTGATCTGTTGCTTACATTAGGTATTATTTTTGGTATAAACCCATCAATTCTTGGATTAACAGTACTGGCGTGGGGCAACTCAATGGGTGATTTGATGTCAAATATTGCACTGGCAATGAATGGTCAAGATGGAGTGCAGATTGCCATGTCAGGATGCTATGCCGGTCCTATGTTCAACACACTTGCTGGTCTGGGCATCTCATTGCTGCTTGCATCTTGGTCTAGAAGACCCCAGTCATTCATAGTTCCTAAAGAAGGTAGCTTATTTTATACGATGGGATTTTTAGTTTTAGCCCTTGTATGGTCACTTGTTGTGCTACCAAGGAACAATATGTGCCCCAACAGGACCTTGGGACTTGGCCTCATTTTAATCTACATAGTTTTCCTCTGCTTCAGGATCAGCACCTCTTTGGATGTTGTGTCATTGGCAGGTGTACACTAG 1947 0.4191 MIRFRGVFNGIYSLVLLTLFYHQKFFLRGLFLGDLPSVPRSSRGGNFDRWSGGFKVTQRKMAEVNINPTNYSSVVVSSVSHNDNMTMNDPKVCDGLFAHEGYSNHCEYLIANPQCNSGGFFNYIAFLYCDCKNVSFLGYAVLFLWLAALFYLLGNTAADYFCCSLEKLSSLLKLPATVSGVSLLPLGNGAPDVFASIAAFMSEDAGEVGLNSVLGGAIFVSCIVVGAISLCVSDRRVQIDRKCFIRDICFFLFTLVSLAIILIVGKVTIGGAIAFISIYLVYAIAVAANEVLRKHAQKFKLDAVTPLLPVRGSVFSHVSEEDEPMHLSLLETASDSEVPLLQSKLPQWMWASNVAIYSNHGVKDSPEGLKFLWGWNDEETANEHSYYSYIRLLWLLEVPLTVPRRLTIPIVEEERWSKGYAVASASFAPILLAFLWNTQDDVTSSSGTIVYVTSGGVGGVLGIVAFLFTRSDRPPQKFLLPWVFAGFLMSIVWFYIIATELVDLLLTLGIIFGINPSILGLTVLAWGNSMGDLMSNIALAMNGQDGVQIAMSGCYAGPMFNTLAGLGISLLLASWSRRPQSFIVPKEGSLFYTMGFLVLALVWSLVVLPRNNMCPNRTLGLGLILIYIVFLCFRISTSLDVVSLAGVH 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1977 648 Gene3D - 421 636 IPR044880 -
Glsi13g1977 648 Gene3D - 174 313 IPR044880 -
Glsi13g1977 648 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 78 643 - -
Glsi13g1977 648 Pfam Sodium/calcium exchanger protein 483 635 IPR004837 GO:0016020|GO:0055085
Glsi13g1977 648 Pfam Sodium/calcium exchanger protein 143 284 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1977 Glsi-ChrGlsi13 35256248 35258194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1977 93 635 Antiporters AT5G17850 44.526 5.44e-131 395