Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi13g1969 | ATGAAGGCTCCGTCCTGCGTTTACTTGCCTAATTCTGGTGAAGGGGAAAGAAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTAGTTTCTTTACCTCCAGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCGGCATCTATGCAAAAGGAGGCTGATTTCGTACCTAGTTACCCTAACCTTCCGTCGAATTTGATTTGCATGCTTCACAATGTTGCTCTGCATGCTGATCCTGAAACTGATGAGGTTTATGCACAGATGACTCTTCAACCTGTAAACAAAGATTATTCGATGCAACCTCCATCTCAGGAGCTTGTTGCCAAAGATTTGCATGACAATACATGGACATTCAGACATATTTATCGCGGAATATCATGTCCCTCTGTTGCTGAGGCAAAATTTCTGGTTGATTTTAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAAGCGTGCTAACAAACAACAACCAGCTCTGTCCTCATCAATCATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTGCAAATAACAGTCCATTCACTATATTCTACAATCCAAGGGCCAAACCCCCTGAATTTGTTATTCCATTGGCCATGTACAATAAAGCTATTTATATTCAAGTTTCGCTTGGAATGAGATTTAGAATGATGTTTGAGACTGAGCAGTCAGGAGTGCGCAGATACATGGGTACAATCACTGGGATCAGTGACTTGGATCCTGTGCGATGGAAGAATTCAAAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGCCCAAGCAGAGTTTCAATTTGGGAAATTGAACCTGTGGTGACTCCTTTCTACATTTGCCCCCCTCCATTTTTGAGGCCCAAGTTCCCCAAGCAACCAGGAATGCCAGATGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCTGTGCCCTGGCTCGGAGATGACTTTGGCACGAAGGATGCCTCAAGTTCTATATTTCCAGCTTTGAGTCTAGTGCAGTGGATGAGCATGCAGCAGAATAATCAGTTTTCTGTTGCTCTTTCATCTGATGATCAATCCAAGTTACTGAGTTTTCGAGCCCCTGCACACTCGGCACAAAGGCTTCAATTCAACAAACCTAATTTACCTAACCAAGTCAACCAACAGCAACAGTCTTGTCAACATGCCATTATGAATAATGGGGTAGTTGCTTCCAGTCAGATTCCAAATCAGAGTGTCAAGCAACCGATAACCTACTCTCAGCTTCAGCAGCAGCAACTACTCTCACTCTCGGGCAATATCCCATCCCAGCAAAGAATTCAATCGGCTAGTAAGAACACATTCCCTCTGACATCCTTTTCACAAGATTCACAATTTCAGCAACAGATAGATCAGCAGCAGCAGACACAGTTGCAACAATCTCCATTGCTGCTATTACAGCAAAGCCAGTCACAAAGGGCACCGGAGCAACTACAAGTGACTGAACTCTCTCAGCAAAACCTCTCGGAGCAACAACTGCAGTTACAGTTGCTACAGAAATTGCAGCAGCAGCAACAGCAACTTCTTTCCCCGGCTAGCCCTCTGTTTCAGCCTCAACTGCTACAGCAACAAAACCAGCAACTACCGCCTCAACAGGTTAGCGACAATGCATTCTCTTCCTCAGCTCTGATGCAATCACAACAGCTTCCTGTGAACCAACCCCAGAACACACATAAACCACTTACAACTACCAGAGTGCCTTCGAGTCTTACAGATGGTGATGCCCCATCATGCTCAACCTCACCGTCAACTAACAACGTCAAGATATCTCCTCCAAATCTACTGAAAAGAAACCAACAAATATCATCGGACACATTAGGAGGGAGCTTGGTAGTTGAGCCCACTACTAATCTGATACAGGAGCTTCAGAGTAAGTCTGACATTCAGATCAAACATGAGCTGCCCAGTGTAAAAGGACCTGACCAACTAAAGTATAAAGGGACAATTACTGATCAGCTGGAAGCTTCCTCTACTGGAACATCTTACTGCCTTGATCCTGGTAATTTCCAGCAAAGCTTCCCATTTCCCAACTTCTGCTTGGAAGGGGATGTACCATCACACCCTAGGAACTATCTACCATTTGCCTCTGATATTGATGGACTAACACCGGAAGCTTTACTGTCAAGGGGGTACGATTCTCAAAAGGATCTTCAAAACTTGCTCTCTAATTATGGCAGTGCTCCAAGAGACATTGAAACTGAGCTGTCCACAGCTGCCATCAGCCCGCAGTCATTTGGAGTGCCAAACATGCCTTTTAAGCCTGGTTGCTCAAGCGATGTTGCCATCAATGATACTGGGGTTTTGAATAATGGCATATGGACTAACCAGACTCAACGAATGCGAACGTATACTAAGGTTCAAAAGCGTGGCTCCGTGGGAAGATGTATTGACGTCACCCGTTACAAGGGATATGATGAGCTGAGGTTTGATTTGGCTCGTATGTTTGGGATCGAAGGGCAGCTAGAAGATCCTCAAAGGACTGACTGGAAATTAGTATATGTGGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCATGGGAGGAATTTGTAAGCTGTGTACAGAGCATAAAGATACTGTCATCGGGTGAGGTGCAGCAAATGAGCTTGGATGGGGATTTAGGTAATGTTCCAATCTCCAATCAAGCTTGTAGTGGGACAGACAGTGGCAACGCATGTAGAGGACAGGATGATGATAACTCTGCTACTTCATTCAATCGGTAA | 2802 | 0.4465 | MKAPSCVYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSNLICMLHNVALHADPETDEVYAQMTLQPVNKDYSMQPPSQELVAKDLHDNTWTFRHIYRGISCPSVAEAKFLVDFRDEKQQLLLGIKRANKQQPALSSSIISSDSMHIGILAAAAHAAANNSPFTIFYNPRAKPPEFVIPLAMYNKAIYIQVSLGMRFRMMFETEQSGVRRYMGTITGISDLDPVRWKNSKWRNLQVGWDESTAGERPSRVSIWEIEPVVTPFYICPPPFLRPKFPKQPGMPDDESDIENAFKRAVPWLGDDFGTKDASSSIFPALSLVQWMSMQQNNQFSVALSSDDQSKLLSFRAPAHSAQRLQFNKPNLPNQVNQQQQSCQHAIMNNGVVASSQIPNQSVKQPITYSQLQQQQLLSLSGNIPSQQRIQSASKNTFPLTSFSQDSQFQQQIDQQQQTQLQQSPLLLLQQSQSQRAPEQLQVTELSQQNLSEQQLQLQLLQKLQQQQQQLLSPASPLFQPQLLQQQNQQLPPQQVSDNAFSSSALMQSQQLPVNQPQNTHKPLTTTRVPSSLTDGDAPSCSTSPSTNNVKISPPNLLKRNQQISSDTLGGSLVVEPTTNLIQELQSKSDIQIKHELPSVKGPDQLKYKGTITDQLEASSTGTSYCLDPGNFQQSFPFPNFCLEGDVPSHPRNYLPFASDIDGLTPEALLSRGYDSQKDLQNLLSNYGSAPRDIETELSTAAISPQSFGVPNMPFKPGCSSDVAINDTGVLNNGIWTNQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRFDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSGEVQQMSLDGDLGNVPISNQACSGTDSGNACRGQDDDNSATSFNR | 933 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi13g1969 | 933 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 104 | 526 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
| Glsi13g1969 | 933 | ProSiteProfiles | PB1 domain profile. | 806 | 899 | IPR000270 | GO:0005515 | |
| Glsi13g1969 | 933 | Pfam | AUX/IAA family | 803 | 892 | IPR033389 | - | |
| Glsi13g1969 | 933 | SUPERFAMILY | CAD & PB1 domains | 819 | 884 | - | - | |
| Glsi13g1969 | 933 | Gene3D | - | 87 | 161 | IPR015300 | - | |
| Glsi13g1969 | 933 | MobiDBLite | consensus disorder prediction | 567 | 616 | - | - | |
| Glsi13g1969 | 933 | Pfam | Auxin response factor | 186 | 268 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
| Glsi13g1969 | 933 | Gene3D | - | 801 | 895 | - | - | |
| Glsi13g1969 | 933 | Gene3D | - | 223 | 294 | - | - | |
| Glsi13g1969 | 933 | FunFam | Auxin response factor | 223 | 295 | - | - |
Showing 1 to 10 of 13 entries
Duplication type information
Functional genes information