Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1967 ATGCAAATGCACCTCACACCGCTATCTCTTGCGATCTTCTTCTTTTTCATTTCTCAAACTCCATCGTTTGCCGCTCCACCCCAAGATCTGGTCCGCTCCTCCTGCGTCCATGCCAGGTATCCCAACCTCTGCCTTCAAACTCTTTCCCCCTACAAGGACGACGCCACCACTCCCAAGCACCTGGCTGAAGCCGCCGTCAAGATTAGCCTCGCTCATGCTAGCAGGCTTTTCGACTACCTCAAGAGCCTGCAGGTGGGGTCGTTGGGGAAGAGGCAGCAAGTGGCGCTGAGGGACTGTGTGGAGCAGATATCAGGGTCGGTGGAGGATTTGAGCAACACCCTTAAGGAGCTACAGCACATGCGAGCGGAGACGTTCCAGTGGCAGATGAGCAACTCTCAGACTTGGGTGAGCGCTGCCTTGACCAATGAAGACGCCTGTGTGGATGGGTTCAACGGAGTGGATGGAAATCTCAAGTGGGAAGTGAAGCGTAGAATCACCCCCGTAGCCAGAGTCACCAGCAACGCCCTCTTCATGATCAATCGCTTAGGGAATCAGAGCCCTCGTCTTCCTTCCAATCAAGCTCACGTACCCTTCCGGACTACGTCATTGGCTATGGAAGGAATCGAAACGGAGGAACCCGCCTTCTTCATAGACGAAACCGATGGCGATTTCTGCAATTCCATTCTCTCTCGTTTCGGCAATTCCACCAATGAAAATCATCAGCACCTCTGTGCAATCATCGGCGCCATGTCCCAGGAGCTCAAAGAACAGAATATCCCCTCCAACCCAGTCGCCTACTTCGGTGCAGCATGCTCTTCCCTCGACCGCCTCTTATCTGAACCCGACCCGCCTAACCACATCGTGGATGCACTTCTCACTATTCTCTCCCTCGTCATTGCCGGACTACCCACTGCAATATTGAAGAAGAAGAGGGAGTTTTTGTCGCAGCTTCTGGTGCATGTTCTTCGGTCTTCTTCGATGGCAGAGAGTTCGGTTATTTCCGGATTGAAATGCATTTCGCATTTGTTGATCCACAGGGATAGTGTTAACTGGTCTGATGTGTCTCAGTTGTTCAGTGTCTTGTTGGGGTTCGTTACAGATTCGCGACCTAAGGTCAGAAGGAAATCGCATTTGTGTCTTCGTGATGTCTTATTGAGTTTACAAAAATCTCCATTGCTGGCATCTGCAAGTGAGGGAATCACAAGCATATTTGAAAGGTTTCTTTTGATTGCTGGTGGAGCAAATGCAAATACTGGTGAAGGACCAAAGGGAGCTCAGCAGGTTCTTTATATTCTTGATGCATTGAAAGAATGTCTTCCTCTTATGTCACTGAAGTACACGACCAGCATTCTTAAGTACTTCAAAACACTTTTGAATCTGCATCAAACACTGGTTACAAGGCGCATAACAGATGGTTTGAGCTTTCTTTGTCTTTACCCAGCGTCAGAGGTTTCCCCTGAAGCATTACTTGAGCTGCTAAGCTTGTTGGCTCTTTCTATCTCAACAAATGAGACGTCTGGAGATGGAATGACATTTACATCTCGCTTGCTAGATGTTGGGATGAATAAAGTTTATTCACTTAATAGACAAATATGTGTGATTAAGCTACCTGTTGTCTTCAACGCCCTCAAAGATATTTTGGCATCAGAACATGAAGAGGCCATACATGCAGCCACGGATACTTTTAAGAGTTTGATACATTCCTGTATTGATGATAGTTTGATCAAACAGGGAGTGGATCAGATCACGTTGAATGCAAACCCAGAATCAAGGAGGTCAGGGCCAACCATCATTGAGAAAATTTGTGCAACTATTGAGAGCTTGCTTGATTATCATTATACTGTTGTCTGGGACAGAGTATTTCAAGTTGTTTCCGCTATGTTTCATAAATTAGGAAATTACTCCACTTATTTTATGAGAGGAATACTCAAAAACTTGGCAGATATGCAGAAGCTGCCTGATGAAAATTTCCCCTTCAGGAAACAGTTGCATGAATGCCTTGGATCAGCTCTTGTTGCTATGGGACCTGGAACTTTTTTGTCCATTCTACCTTTGAATTTGGAAGCTGAGGACTTATCAGATGCAAACATTTGGCTTTTTCCAATTTTAAAACAGTATACTATTGGTGCACATTTAAGCTTTTTTACTGAGAAAATTTTGAGTATGATTGAACGTGTAAGGCAGAGGTCTCGACAGTTTGAGTTACAAGGGCTGATGGTGTCATCAAGGAATGCAGATGCCCTTGTTTACTCTCTGTGGTCTTTGCTTCCTGCATTTTGCAATTATCCTTTGGATACTGCTGAAAGTTTCATGGATCTGGAGAAAACTTTATGTATCAAGCTTCAAGAAGAACCTGACATTCGTGGAATAATATGCACAAGCTTGCAGCTTCTTGTTCAACAAAACAAGAAAATTGTGGATGACAAATATGATAAGGAATATGTTGAAGATAGGGCTGGACAGCATAGTTTGGTCCATTGTACAAAACAGGTTGCAACAAACAATTTGAATGTGCTGAAATCATATGCTCAGGAATTGTTAACTGTTCTATCACGTGTTTTTTTGAAGTCTACAAAAGATGATGGTGGTTGTCTACAGTCCACGATTAGTGAGATTGCTTCCATATCAGAGCAAGCAGTAATATCCAGGCTTTTCAAAAGCACAATGCATAAGCTTTTAAAAGTCACTCAAGAGGCCAGTAAAGCAGACAATACCAAAAGTTATAGTTCCATGCAGATTGATGATTCATCAAATAACGTGTCTCCATCAGTTGTCAGGGCACAGCTTCTTGACTTGGCAGTTTCCCTGTTGCCTGGTTTAAATTCTAAAGAGATTGATCTACTTTATGTTGCAATAAAGCCAACATTACAGGATGTTGAAGGTGTTATACAAAAGAAGGGATACAAAGTACTTTCAATCATTCTCAGGGACTCGAATGAGTTTATTTCTTCAAAGTTTGAAGAACTGCTTGGGCTTATGGTTGAAATTCTGCCTTCATGCCATTTTTCTGCCAAACAGCACAGACTCAATTGCCTTTACTTCCTAGTAGTCCATGTCTCTAAGGATAATCTGGAGCAGAGGTGGCACGAAATTGTTGCTTCTTTCCTTACTGAAATAGTACTTGCTCTTAAGGAGGCTAATAAGAAAACCAGGAACAGGGCTTTTGATATTCTTGTTCAAATTGGCCATGCATTTGGAGATGAAGAGAGAGACGGGAATAAAGAAAATCTATATCAATTTTTCAACATGGTTGCTGGAGGCCTTGCTGGTGAAACTCCACATATGATAAGTGCAGCAGCCAAAGGTTTAGCTCGTTTGGCATATGAGTTCTCTGATCTTGTATCAACTGCTTTCAATTTGCTCCCATCTACGTTTCTCCTACTCCAGAGAAAAAACAGAGAAATAATTAAGGCTAACTTAGGTTTATTGAAGGTATTAGTAGCCAAATCACAAGCTGAAGGGTTGCAAATGCACCTGAGGAGCATGGTGGAAGGTTTGATGAAGTGGCAAGATAACACCAAAAATCACTTCAAAGCAAAGGTTAAGCTTCTTTTGGAAATGCTTGTCAGGAAGTGCGGACTGGAGGCTGTTAAAGCTGTCATGCCTGAAGATCATATGAAACTTCTTACCAACATACGCAAGATCAAGGAGAGGAAAGAAAGGAAACGAGGTGCTAAATCTGAAGAAAATAGATCTTGTCTTTCAAAAGCAACTACTTCCAGGCAAAGTATGTGGAATCATACAAAATTTTTTTCTGATTTTGATGATGAAGATAGTGGGGGAAGTGATGCAGAATACCTGAACACCAAGACAATTTCTAGGGGGGACAAGTCTTACTCACATGGCAAATCAGCAGCATCTTCATTTCGGTTCAAGATCGGACTAAAGAAAAACTTACCTGAGCATTTGTCTGACCAATCAGATGATGAGCCGCTTGATTTGCTTGATCGGCAGAAAACAAGGTCAGCTCTTAGATCGTCTGAGCATCTGAAAAGGAAGTCAAGATTAGATGATGAAATTGAGGTAGATTCTGAAGGACGCATGATTATCCGTGAGGAAGGGGAACTGAAGAAGGGAAAACCTGCTGACCCTGATTTTGATACTAAGAGCGAAGCTGATACTCACTTGTCTGCAAAGTCTGGGACTAGAGTGCAGAAGCGCAGAAAAACATCAGTCTCTGGGTGGGCTTACACAGGGAATGAATATGCTAGCAAGAAAGCAAGTGGGGATGTAAAGAGGAAGGACAAGCTTGAGCCTTACGCATATTGGCCACTTGATCGGAAGATGATGAGCCGTAGGCCACAGCACCGAGCTGCTGCAAGGAAAGGAATGGCAAGTGTTGTAAAGATGACAAAAAGGCTTGCAGGCAAGAGTGCCTCTAGCGTGCTGTCTCAAAAGAGTTTGCAACTAAAAAGGACTAAGAAAAAAGGCAGCAAGAAATAG 4443 0.4324 MQMHLTPLSLAIFFFFISQTPSFAAPPQDLVRSSCVHARYPNLCLQTLSPYKDDATTPKHLAEAAVKISLAHASRLFDYLKSLQVGSLGKRQQVALRDCVEQISGSVEDLSNTLKELQHMRAETFQWQMSNSQTWVSAALTNEDACVDGFNGVDGNLKWEVKRRITPVARVTSNALFMINRLGNQSPRLPSNQAHVPFRTTSLAMEGIETEEPAFFIDETDGDFCNSILSRFGNSTNENHQHLCAIIGAMSQELKEQNIPSNPVAYFGAACSSLDRLLSEPDPPNHIVDALLTILSLVIAGLPTAILKKKREFLSQLLVHVLRSSSMAESSVISGLKCISHLLIHRDSVNWSDVSQLFSVLLGFVTDSRPKVRRKSHLCLRDVLLSLQKSPLLASASEGITSIFERFLLIAGGANANTGEGPKGAQQVLYILDALKECLPLMSLKYTTSILKYFKTLLNLHQTLVTRRITDGLSFLCLYPASEVSPEALLELLSLLALSISTNETSGDGMTFTSRLLDVGMNKVYSLNRQICVIKLPVVFNALKDILASEHEEAIHAATDTFKSLIHSCIDDSLIKQGVDQITLNANPESRRSGPTIIEKICATIESLLDYHYTVVWDRVFQVVSAMFHKLGNYSTYFMRGILKNLADMQKLPDENFPFRKQLHECLGSALVAMGPGTFLSILPLNLEAEDLSDANIWLFPILKQYTIGAHLSFFTEKILSMIERVRQRSRQFELQGLMVSSRNADALVYSLWSLLPAFCNYPLDTAESFMDLEKTLCIKLQEEPDIRGIICTSLQLLVQQNKKIVDDKYDKEYVEDRAGQHSLVHCTKQVATNNLNVLKSYAQELLTVLSRVFLKSTKDDGGCLQSTISEIASISEQAVISRLFKSTMHKLLKVTQEASKADNTKSYSSMQIDDSSNNVSPSVVRAQLLDLAVSLLPGLNSKEIDLLYVAIKPTLQDVEGVIQKKGYKVLSIILRDSNEFISSKFEELLGLMVEILPSCHFSAKQHRLNCLYFLVVHVSKDNLEQRWHEIVASFLTEIVLALKEANKKTRNRAFDILVQIGHAFGDEERDGNKENLYQFFNMVAGGLAGETPHMISAAAKGLARLAYEFSDLVSTAFNLLPSTFLLLQRKNREIIKANLGLLKVLVAKSQAEGLQMHLRSMVEGLMKWQDNTKNHFKAKVKLLLEMLVRKCGLEAVKAVMPEDHMKLLTNIRKIKERKERKRGAKSEENRSCLSKATTSRQSMWNHTKFFSDFDDEDSGGSDAEYLNTKTISRGDKSYSHGKSAASSFRFKIGLKKNLPEHLSDQSDDEPLDLLDRQKTRSALRSSEHLKRKSRLDDEIEVDSEGRMIIREEGELKKGKPADPDFDTKSEADTHLSAKSGTRVQKRRKTSVSGWAYTGNEYASKKASGDVKRKDKLEPYAYWPLDRKMMSRRPQHRAAARKGMASVVKMTKRLAGKSASSVLSQKSLQLKRTKKKGSKK 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1967 1480 NCBIfam pectinesterase inhibitor domain 8 182 IPR006501 GO:0004857
Glsi13g1967 1480 MobiDBLite consensus disorder prediction 1351 1394 - -
Glsi13g1967 1480 SUPERFAMILY ARM repeat 227 1184 IPR016024 -
Glsi13g1967 1480 Coils Coil 100 120 - -
Glsi13g1967 1480 Pfam Plant invertase/pectin methylesterase inhibitor 29 176 IPR006501 GO:0004857
Glsi13g1967 1480 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 183 IPR035513 -
Glsi13g1967 1480 CDD PMEI-like_3 33 182 - -
Glsi13g1967 1480 Gene3D - 955 1169 IPR011989 -
Glsi13g1967 1480 MobiDBLite consensus disorder prediction 1454 1480 - -
Glsi13g1967 1480 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 183 IPR035513 -
Glsi13g1967 1480 SMART PMEI_2 26 178 IPR006501 GO:0004857
Glsi13g1967 1480 MobiDBLite consensus disorder prediction 1217 1238 - -
Glsi13g1967 1480 FunFam Pectinesterase inhibitor 3 26 183 - -
Glsi13g1967 1480 Gene3D - 218 697 IPR011989 -
Glsi13g1967 1480 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 222 1466 - -
Glsi13g1967 1480 MobiDBLite consensus disorder prediction 1351 1376 - -
Glsi13g1967 1480 Pfam NUC173 domain 600 802 IPR012978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1967 Glsi-ChrGlsi13 35182399 35195500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1967 21 215 Carbohydrate Esterase AT3G49220 29.500 1.59e-13 73.6