Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1964 ATGGATGACAGCGGAGGCTCCAAATTGACTGGAATTAGGCAGATTGTGAGGCTAAAGGAAATACTTCAGAGGTGGCAATCTGTCACACTGGGCTCAAAAGAGAACTGTCACCGTTCTGATGTGAATCATGGGAGCTTATCGCCCATAATTAACAGGAGGCTAACAAATGTTATGTATTGTGACTCTGATGAGGATACCTGCCACAGCCCTGAGCCACCACCAGATGTTCCCAAAGGTTATTTGGCAGTCTACGTTGGGCCAGAGCTTCGGAGGTTCATCATTCCCACCAGCTACCTTAGTCACTCTCTATTCAAAGTTCTGCTGGAAAAGGCTGCAGAGGAATTCGGGTTTGACCACAGCGGTGGGCTCACGATCCCATGCGAGATTGAGACCTTTAAATACCTCCTGAACTGCATGCAGAACAATCAGAAAGATCCACATGATGAAAGTTCCTGTAAGTTCATTCCATTATTTGCTATTATTCACATCTGCCAAAAAGTCAATGCTCCAGTATCTCAATAA 522 0.454 MDDSGGSKLTGIRQIVRLKEILQRWQSVTLGSKENCHRSDVNHGSLSPIINRRLTNVMYCDSDEDTCHSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDHSGGLTIPCEIETFKYLLNCMQNNQKDPHDESSCKFIPLFAIIHICQKVNAPVSQ 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1964 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 55 135 IPR003676 GO:0009733
Glsi13g1964 173 Pfam Auxin responsive protein 67 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1964 Glsi-ChrGlsi13 35153150 35153671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1964 1 145 Calmodulin-binding Proteins AT3G43120 70.270 2.69e-74 218