Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1951 ATGCTATCACCGTCACCGACCACAGATTTCACGTTTGAGAACGCATTTAATGTTATTACTGCACACCCAATCGTGATTTTCAAGTTTGCAATGTCATGTTCGTGGCCACTTAGAAAAAGGACAAGTGGATATCAAAGAGCAGAACTTGCAAATCCCAAAAGGGCATTTCAGGATTTTGACTTAATATTAGAACGGCGAAGAAACAAGAGGAAACAGAAGTTGAGGAGGAGGATTACCATTGCGGCAATTTCTGCTATTGTCCTTGCCAGTCTGATAGCAGCTGCAGTATTCGTTGTTGTCACGAAATCTGGCCAGGACAAGGCCAGGGCATCTCCCTCGGCTACCAACCAGATATCACATTCTGAGGAGATTGTGAAAATGGTATGTAACTCCAGAGACTACAAGAACCGATGTGAAACCACCCTTAGCAAGGCAGTGCAGAAAGACCTTAAAGGGACGCAGTTCAAAGATCTTCTAAAGGTTTCTATCCACGCTGCTGAGGAAGAGGTTACTAGGGCCTTCAACAAAACCACCTCCATAAAATTCGAAACTAAACAAGAGAAGGGAGCCTATGATGACTGTAAGCTACTCATTAAGTATGCCAAGAAAGAACTTGGATTCTCCAACTCCCAAGTTGGTGCAAATGATTTGAACAAGCTTTCCTCAAGAACCGGTTATTTGAACAGTTGGCTCAGCGCAGTCATCTCTTACCACCATACATGCGTTGATGGATTTCCCATGGAAAATTGA 750 0.4347 MLSPSPTTDFTFENAFNVITAHPIVIFKFAMSCSWPLRKRTSGYQRAELANPKRAFQDFDLILERRRNKRKQKLRRRITIAAISAIVLASLIAAAVFVVVTKSGQDKARASPSATNQISHSEEIVKMVCNSRDYKNRCETTLSKAVQKDLKGTQFKDLLKVSIHAAEEEVTRAFNKTTSIKFETKQEKGAYDDCKLLIKYAKKELGFSNSQVGANDLNKLSSRTGYLNSWLSAVISYHHTCVDGFPMEN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1951 249 CDD PMEI-like_3 128 245 - -
Glsi13g1951 249 Gene3D Invertase/pectin methylesterase inhibitor family protein 121 249 IPR035513 -
Glsi13g1951 249 PANTHER PECTINESTERASE 92 244 - -
Glsi13g1951 249 NCBIfam pectinesterase inhibitor domain 115 245 IPR006501 GO:0004857
Glsi13g1951 249 SMART PMEI_2 120 247 IPR006501 GO:0004857
Glsi13g1951 249 Pfam Plant invertase/pectin methylesterase inhibitor 124 245 IPR006501 GO:0004857
Glsi13g1951 249 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 123 245 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1951 Glsi-ChrGlsi13 35039031 35040085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1951 55 245 Carbohydrate Esterase AT4G33230 35.981 1.09e-30 117