Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1945 ATGGATGAAAAACTTAATTCTGATGGTGTGAAACTCAAGGCAGAGGAAGCCGCCGGAGGAGGAGAGAAAAACCACATTTTTGCTCCAGATTTTAATCCTCCTGTTACTAAAAACCCTGCTGAGGATCCTCTGGGAGAAGTAAAAGAGGCACGGGAAAATTTAGCCGGAGATTTACGGGGAAAGAAACTGGCCCCGAACAACGTGGGTGATGAGTTGACGATGCATCTCTCAGGAAACAGGTCTGGACTGAATGCAGTGATTCCTAGTACCAGTCAGCTTACCATCTTCTATAATGGGCGTGTCTGCATCTATGATGGGATTCCTGCAGAAAAGGTGCATGAAATAATGCTTATCGCTACCGCTGCTGCTGATGCTGAGTCTGCTGAAATGAAGAAGATTGGGACGCAATCCCCCGTCACTTCACCACAAGGAACCCCTGATAATTTGGCTTCACCTCAGGCTCTTCCTTCACAGAAGAGTTCCATTTGTAGGTTGCAAGAATTTCCAATCGCACGCAGACAGTCACTTCAGCGTTTTCTTGAGAAGCGACGAGACAGGTTAGGAAGCAGGGCCCCTTATTTTATCCCATCAACTACAAAAGGGGGTGACAACTTTGAAAACAATTTCTGTGCCGACAATGCCCCAGATTTGGCTTCCTTCAAAGGATCGGAGGAGGAAGTTCAACCAAGTATCGCTGCCTCTCGAACTTAA 711 0.4684 MDEKLNSDGVKLKAEEAAGGGEKNHIFAPDFNPPVTKNPAEDPLGEVKEARENLAGDLRGKKLAPNNVGDELTMHLSGNRSGLNAVIPSTSQLTIFYNGRVCIYDGIPAEKVHEIMLIATAAADAESAEMKKIGTQSPVTSPQGTPDNLASPQALPSQKSSICRLQEFPIARRQSLQRFLEKRRDRLGSRAPYFIPSTTKGGDNFENNFCADNAPDLASFKGSEEEVQPSIAASRT 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1945 236 MobiDBLite consensus disorder prediction 129 156 - -
Glsi13g1945 236 Pfam tify domain 88 119 IPR010399 -
Glsi13g1945 236 MobiDBLite consensus disorder prediction 1 20 - -
Glsi13g1945 236 SMART tify_2 86 121 IPR010399 -
Glsi13g1945 236 MobiDBLite consensus disorder prediction 133 156 - -
Glsi13g1945 236 Pfam Jas motif 169 193 IPR018467 -
Glsi13g1945 236 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 71 200 IPR040390 -
Glsi13g1945 236 ProSiteProfiles Tify domain profile. 86 121 IPR010399 -
Glsi13g1945 236 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1945 Glsi-ChrGlsi13 34994670 34997496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1945 92 193 Tify Gene Family AT5G20900 49.107 6.14e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi13g1945 tify 7.6e-17 No_clan