Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1943 ATGGCCACACCTCCAACACTAACATGCCCGGCACCTATGAAGGCCACCTCCAATGGGGCCTTCCAGCATGAAAACCCCCTCGACTTCGCCCTTCCCCTCTTAATCCTCCAGATATGTTTGGTCATCGTCTTTACCAGATTTCTTGCTTTCCTTTGCAGGCCACTCAGACAACCCAGAGTCATTGCAGAGATCATTGGAGGAATACTACTTGGACCATCCGCATTTGGGCGAAGCGAGAAATTCCTGAACACATTTTTCCCCAAGAAAAGTTTGACTGTTCTTGAGACACTAGCCAATGTTGGGCTTTTGTTCTTCTTGTTTCTGGTGGGTCTTGAGCTTGACATGCGTTCAATTCGGCGATCAGGTCCTAAAGCTTTGGGGATTGCCGTTGCTGGCATATCTGTCCCTTTTATACTTGGCATTGGCACATCTTTGGCTCTTCGAGCCACCATATCCAAGGGCGTCGAACCAACCGCCTTCCTTGTCTTCATGGGAGTTGCTCTCTCAATCACAGCATTTCCCGTCCTTGCTCGTATCCTGGCAGAGCTTAAACTCCTTACAACTGATGTTGGTCGCATTGCAATGTCTGCTGCCGCTGTTAATGATGTTGCAGCGTGGAGTCTTCTTGCTCTTGCTATTGCCCTCTCTGGCGATAACGCTTCCCCCCTCATTCCTATCTGGGTATTACTATGTGGCACTGCTTTTATCGTCTTTTCTTTCTTTGCCATCAAACCCCTTCTGACAATCATGGCTAGGCGTTCCCATGAGGGTGAACCCGTGAAGGAGCTCTACGTATGCATCACCCTGTCTATTGTCTTGGCTGCTAGTTTTGTCACCGATACCATTGGCATTCACGCGCTCTTTGGGGCTTTTGTAGTTGGTGTCATTGTCCCCAAAGATGGCCCTTTTGCTGGGGTGTTGATTGAGAAGATAGAGGACATCGTGTCCGGCCTTTTCCTACCACTCTATTTTGTGTCTAGTGGGTTGAAGACTAACGTGACAACTATCAGTGGAGCAACTTCTTGGGGGTTACTAGCACTGGTTATATTCAATGCTTGCTTTGGAAAGATTATTGGCACGCTCCTTGTGTCTCTTGCGTGCAAAATGCCTTTTAGAGAAGCACTCACGCTTGGATTTCTCATGAACACCAAAGGCTTGGTAGAGCTCATTGTTCTCAACATTGGAAAGGATCGCAAGGTACTGAATGACCAGTCATTTGCAATTTGTGTTCTGATGGCATTGTTCACCACCTTCATCACTACCCCAATAGTGATGGCGCTGTACAAACCAGCTCGCAGGGGAGCACCTTACAAGCATAAAACAATTCAGCGCAAAGATGTTGACTCAGAGCTCCGAGTGCTAGCTTGCTTCCATAGCACCCGCAACATTCCTACACTGATCAATCTAATAGAGTCTTCTCGTGGAACCCGAAAGAGAGGAAAGCTGTGCATATATGCAATGCACTTGATGGAACTCTCGGAGCGATCTTCGGCCATCACAATGGTTCACAAGGCACGCAATAATGGCCTACCCTTCTGGAACAAGAAACAGGACGACAAAGATCAAATGGTGATTGCATTTGAGGCTTACGGGCAGCTAAGTAGTGTCAATGTTCGCCCCATGACAGCCATCTCTGCTCTCGACAATATCCACGAGGATATTTGTACGAGTGCTCATTTTAAGCGAGCGGCCATGATCATCCTCCCATTCCACAAACACCAACGCCTTGATGGATGTATGGAGTCCCTGGGACATTCGTTCCGCGTAATGAACGAGCTTGTGCTTAGCCATGCCCCTTGCTCAGTGGGAATTCTGGTTGATCGTGGCCTTGGAGGGACAAGTCAAGTCCATGCCAGCGATGTGTCCTACAAGGTAATGGTACCCTTCTTTGGAGGGCGCGATGACCGTGAAGCACTAGCCTATGGGATGAGAATGGCAGAGCACCCAGGGATCTTGGTCACAGTGGTTAAGTTTGTAGCTCCACCCGGGAAGACATTAATGTTTGGTGCCAAATTGGTGGGTGTAACAGCAAACCAGGACAAGAAAGTTATTACTAACGAGAATGATAAAGAGGAGGACGATGAATTATGGTCGGAGTTCTTAAGCACACGAAGCACGAACAAGGAGTCTATGGTGTACGAAGAAAGGTTAGTGGAAAGCAAAGGAGATATTATAACAGTATTAAAGGAAATGAATAAGAGCAATCTAGTAGTGGTGGGTAGGATGCCAGCAGTAGCACCTTTGGTAGAAGACAATGATTGCCCGGAGCTTGGTCCCATTGGAAACTACTTGGCTTCTTCAGACTTCTCTACTAGGACATCAGTAATGGTGATTCAGCAATATAATCCCACAACAGATATTCAACCCGTGGTGATGGAGGCATCTGATTACCCAGATGTTCCAGACACACCAAGGAATGTATAG 2424 0.4752 MATPPTLTCPAPMKATSNGAFQHENPLDFALPLLILQICLVIVFTRFLAFLCRPLRQPRVIAEIIGGILLGPSAFGRSEKFLNTFFPKKSLTVLETLANVGLLFFLFLVGLELDMRSIRRSGPKALGIAVAGISVPFILGIGTSLALRATISKGVEPTAFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWSLLALAIALSGDNASPLIPIWVLLCGTAFIVFSFFAIKPLLTIMARRSHEGEPVKELYVCITLSIVLAASFVTDTIGIHALFGAFVVGVIVPKDGPFAGVLIEKIEDIVSGLFLPLYFVSSGLKTNVTTISGATSWGLLALVIFNACFGKIIGTLLVSLACKMPFREALTLGFLMNTKGLVELIVLNIGKDRKVLNDQSFAICVLMALFTTFITTPIVMALYKPARRGAPYKHKTIQRKDVDSELRVLACFHSTRNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERSSAITMVHKARNNGLPFWNKKQDDKDQMVIAFEAYGQLSSVNVRPMTAISALDNIHEDICTSAHFKRAAMIILPFHKHQRLDGCMESLGHSFRVMNELVLSHAPCSVGILVDRGLGGTSQVHASDVSYKVMVPFFGGRDDREALAYGMRMAEHPGILVTVVKFVAPPGKTLMFGAKLVGVTANQDKKVITNENDKEEDDELWSEFLSTRSTNKESMVYEERLVESKGDIITVLKEMNKSNLVVVGRMPAVAPLVEDNDCPELGPIGNYLASSDFSTRTSVMVIQQYNPTTDIQPVVMEASDYPDVPDTPRNV 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1943 807 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi13g1943 807 Gene3D - 33 435 IPR038770 -
Glsi13g1943 807 PANTHER CATION/H + ANTIPORTER 8 782 - -
Glsi13g1943 807 FunFam Cation/H(+) antiporter 15 33 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1943 Glsi-ChrGlsi13 34988709 34991326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1943 2 797 Antiporter Super Family AT3G17630 71.608 0.0 1132