Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1904 ATGGAGGAAAACCTACCTCCCGGGTTCAGATTCCATCCTACAGATGAAGAGCTCATCACCTATTATCTGACAAGGAAAGTGTCAGATACCGGTTTCACCTCCAAAGCTATAGCAGTTGTTGATCTCAACAAGAATGAACCCTGGGACCTTCCAGGCAAGGCTTGTATGGGAGAGAAGGAATGGTATTTCTTCAGCATGAGAGACCGGAAGTACCCAACTGGACTTCGGACCAACCGAGCCACTGAATCAGGGTACTGGAAAACGACGGGGAAAGACAAGGAAATTTTGCGTGGCGGGGTTTTGGTAGGAATGAAGAAAACCCTAGTCTTTTATAAGGGCAGAGCTCCAAGGGGTGAGAAAAGCAATTGGGTTATGCATGAATACAGGCTGGAAAACAAACATCACTTTACGCCTTCAAAGGAAGACTGGGTGGTCTGCAGGGTCTTCCAAAAAAGCTCGTCAGCAAAGAAAACACAAGAGACATCATCCTCCCAACCATCTCTAGAGTCTCCCTGTGATACAACCTCCATGGTCCATGAATATGATGATGTTGATCTGCTAAATTTAAACAGTCTCGCAAATTCGTCAAGCGGGTTCACTACTAGCAATATTTCGTCTCAAATTTACAATGGTGGTCACAGTTATGTTAACACAAATATGAACTTAACCTTGAATCCCTCTTTTCCATCCTTTCCATGGCCAAATCCCTCTGTGAATTCCTTCCTACTTAAGGCATTACAGCTTAGGAGTTGTCAACAAAGAGAAGGTGCAACGACAGGTCATATTGCTTCATATATGCCGCCTCAAGTAGTTTCCCACGTAATCGGAACTGATCATCTCAGTTCAAATATCAGATTTAGTGCTTCTTCCTCGTGTATGCAGCAGCAGCAACCATTCAATTTGGACTTGGACTCCAGTTGGTGA 924 0.4437 MEENLPPGFRFHPTDEELITYYLTRKVSDTGFTSKAIAVVDLNKNEPWDLPGKACMGEKEWYFFSMRDRKYPTGLRTNRATESGYWKTTGKDKEILRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFTPSKEDWVVCRVFQKSSSAKKTQETSSSQPSLESPCDTTSMVHEYDDVDLLNLNSLANSSSGFTTSNISSQIYNGGHSYVNTNMNLTLNPSFPSFPWPNPSVNSFLLKALQLRSCQQREGATTGHIASYMPPQVVSHVIGTDHLSSNIRFSASSSCMQQQQPFNLDLDSSW 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1904 307 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Glsi13g1904 307 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Glsi13g1904 307 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Glsi13g1904 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 213 - -
Glsi13g1904 307 FunFam NAC domain-containing protein 100-like 14 155 - -
Glsi13g1904 307 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1904 Glsi-ChrGlsi13 34710491 34712651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1904 1 302 NAC Transcription Factor Family AT3G18400 56.156 2.56e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi13g1904 NAM 5e-41 No_clan