Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1896 ATGTGTTGTTTCGCGACTTCAGAGTACCTCGTGCAAGTTGCAACTGCCGTTAAGTTGAAATTTGGCTTAGGGTTTTCACTTATCTGCGACATCACATCAGGGACTCTCACTATAGGCAGTAGATCTCTTTGGACTCGCATCTTCTTGACTCGAGGATTGCCCTGTAGTGTTTGCAGGATGGGATATGTAATTGACTTAACCTAACTTGTGAAGATGTACACATCAAGGAAGAAAATCCATAAAGATAAGGATGCTGAGCCGACTGAGTTTGAAGAGTCTGTTGGACAGGCATTGTTTGATCTGGAAAATACCAATCAGGAGCTGAAAAGTGATCTAAAAGATCTGTACATAAATTCAGCAGTCCAAATTGATGTCTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTGAGGAAAGCTTTCCGGAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGGAAGGATGTGATCTTGATTGCAACCCGGAGGATATCCAGGCCACCAAAGAAAGGATCTGCTGTTCAGCGTCCTCGCAGCCGTACACTTACTGCTGTGCATGAAGCTATGCTGGAGGATGTTGTGTTGCCCGCAGAGATTGTTGGGAAGCGTATTAGGTATCGAATTGATGGATCCAAGATTATGAAGGTTTTCTTGGACCCTAAGGAGCGAAACAACACCGAGTACAAGTTGGACACGTTTGCTGCAGTATACAGAAAGCTGTCGGGCAAAGACGTTGTGTTTGAGTATCCTATCACAGAGGCGTAG 789 0.4499 MCCFATSEYLVQVATAVKLKFGLGFSLICDITSGTLTIGSRSLWTRIFLTRGLPCSVCRMGYVIDLTXLVKMYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVILIATRRISRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRIRYRIDGSKIMKVFLDPKERNNTEYKLDTFAAVYRKLSGKDVVFEYPITEA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1896 262 Pfam Ribosomal protein S7e 78 257 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi13g1896 262 Coils Coil 98 118 - -
Glsi13g1896 262 ProSitePatterns Ribosomal protein S7e signature. 150 163 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi13g1896 262 PANTHER 40S RIBOSOMAL PROTEIN S7 72 261 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1896 Glsi-ChrGlsi13 34660346 34664531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1896 72 262 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.628 2.10e-114 325