Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1890 ATGGTGGCCAAACGGTTTTTTGATGATTCTGACGAAGATCCAGATAAACCAAGTGACAAACGGATGAGACCTACCAGGCCATCTCTTGCTTCGGTAATAGGAGAAGTGGTTATGGTGAAAAACTTGCAGAACCTTTTCTCAACCTTGGAACCTTTGCTTAGAAGGGTGGTGAGTGAAGAGGTGGAGCGTGCAATGAGACATTGTTGTATAACAAGGTCTCCTTCGTTGAGGATCCAAGCATCAGAGCAAGCATCAAGCGACCTGCAACTAAGCTTCAACAAAAGGCTTTCCATCCCTATATTCACTGGCAGCAGGATACAAGACATTGATGGCAACCCCATCCATGTCCTTCTTGTTGAGAAAAGCGGTGATCGAAGGGTTCCCACAAGTCTCCCTTACCCCATAAAGCTAGAAATAGTGGTTCTTGATGGGGATTTTCCACCGGCAGATAAAGAGGCGTGGACAAGCGAGGAATTTAACAGCCGCATAGTGAAGGAGAGAACCGGAAAGCGGCCATTGCTTGCTGGAGAATTGAATCTGACCATGAGGGATGGCATTGCATTCACCGGAGACATAGAGTTTACAGATAACTCTAGTTGGATAAGGAGCAGGAAGTTCAGAGTTGCGGTGAGAGTGGCTCCGGGGAGTAAACAAGGTGTTCCGATTCGCCAAGGCATGACGGAAGCATTTATCGTAAAGGATCATCGTGGAGAACTGTACAAAAAACACCATCCGCCCATGTTGCAAGACGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAAAAGTTGTCCTCAGAGGGCATCAGCACGGTGCAGGAGTTTCTCAAGTTGTCTGTGGTTGATCCTCATAAACTCAGAAAGATTTTAGGGGTTGGAATGTCGGAGAAAATGTGGGAAGCGACAATGAAGCATGCAAGGACTTGTAACCTGGGCAACAAGCTCTACACATACCGGGGACCTCATTTTACAATGTTTCTGAATCCCATATGCCAAGTGATTAGAGCTGATATCAATGGCCAGATAATCCACGGCAGAGAGCTGAATAGCATGAATAGGAGCTATATCGAGAAATTGGCGAGAGAAGCATATGTGAGATGGAATAGCTTGGAGGAAACCGACGGGCTTTTGAATGATAACGTCTCCTTATTAACCCAAGGTGAAAGTGTGGGGCAAATTCCAGAGAGCCATCAAGCATCGGTAGTAACATATGATCATCACGACTACTTTGGCGATAATAAATTATCAACAGAGGTTGGCAGCTATGCACAAATCGGATGCAGTGACTGGTCATTGAACCCAACATACACCACATTATTGGGGAATGCCAATGTTGCTCCTTTTAGCCTCTCAGAGTCACAGTCAGATGGTGACATCACCCCTTCAGGGTCCCTCATTGATGGGGCTCCAAAGTGGCAATAG 1434 0.4637 MVAKRFFDDSDEDPDKPSDKRMRPTRPSLASVIGEVVMVKNLQNLFSTLEPLLRRVVSEEVERAMRHCCITRSPSLRIQASEQASSDLQLSFNKRLSIPIFTGSRIQDIDGNPIHVLLVEKSGDRRVPTSLPYPIKLEIVVLDGDFPPADKEAWTSEEFNSRIVKERTGKRPLLAGELNLTMRDGIAFTGDIEFTDNSSWIRSRKFRVAVRVAPGSKQGVPIRQGMTEAFIVKDHRGELYKKHHPPMLQDEVWRLEKIGKDGAFHKKLSSEGISTVQEFLKLSVVDPHKLRKILGVGMSEKMWEATMKHARTCNLGNKLYTYRGPHFTMFLNPICQVIRADINGQIIHGRELNSMNRSYIEKLAREAYVRWNSLEETDGLLNDNVSLLTQGESVGQIPESHQASVVTYDHHDYFGDNKLSTEVGSYAQIGCSDWSLNPTYTTLLGNANVAPFSLSESQSDGDITPSGSLIDGAPKWQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1890 477 PANTHER OS02G0177800 PROTEIN 3 401 IPR012416 GO:0005516
Glsi13g1890 477 Pfam Calmodulin binding protein central domain 247 313 IPR046830 -
Glsi13g1890 477 MobiDBLite consensus disorder prediction 1 27 - -
Glsi13g1890 477 Pfam Calmodulin binding protein C-terminal domain 318 376 IPR046829 -
Glsi13g1890 477 MobiDBLite consensus disorder prediction 1 23 - -
Glsi13g1890 477 Pfam Calmodulin binding protein-like N-terminal domain 88 235 IPR046831 -
Glsi13g1890 477 MobiDBLite consensus disorder prediction 455 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1890 Glsi-ChrGlsi13 34612967 34615750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1890 4 384 Calmodulin-binding Proteins AT4G25800 48.974 1.57e-115 350