Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi13g1868 | ATGCTGGTGAAAATGGAGGGAAGCGTAACAAAATGTAGGTTCCAAAACAAAAACATCCCCTCTTTCGTTACTTGCTCTGCTGTCTCTCACTCTAGTTGCGTGCTCGCCAAAATCCTTGTTCATTTGCAGAATTTCGGTGGTCTTCCACCATGGGAGGACATCCGTTCTTTACAGCTTGAAACAGCAGATATAGCAGAAGACAATAATGGGGTTGTAAATCCAGAGGATGCAAAGCCAGAAGAATCTGAGAATTACGATAAAATGGATGAAGATCCAAAGCAGGAGGTTCAGGCTCAGCCTGTCCGGGCTGAGCCAAAAGATAAGGAAGTCCCTTCTGTGGAAGAGGAAGAGGATGCGGTGGAGGAAAATAAGAAAAAACACTTGAATGTTGTGTTTATTGGCCATGTTGATGCTGGTAAGTCTACAACTGGTGGCCAGATACTTTTCCTTAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAGAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACAAACGAGGAGGAGAGGGTAAAGGGTAAAACAGTTGAAGTTGGAAGAGCACATTTTGAGACTGAGACAACAAGGTTCACAATTTTGGATGCACCCGGTCACAAAAGTTATGTCCCCAACATGATCAGTGGTGCGTCTCAAGCTGATACCGGAGTATTGGTGATATCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAGACACTAGGTGTGGCTAAGCTGCTTGTTGTTGTCAATAAAATGGATGATCCTACAGTCAATTGGTCAAAAGAACGGTATGATGAAATTGAATCCAAGATGGTTCCCTTTCTGAAGCAATCAGGCTACAATGTGAAGAAAGATGTCCTGTTCTTACCAATATCTGGGCTGATTGGCACAAACTTGAAAACAAGAGTGGATAAAAGCATTTGTCCATGGTGGAATGGGCCCTGTCTATTTGAAGCTCTCGATGCTGTTGAAGTTCCTCCTCGAGATCCCAAAGGTCCATTCAGGATGCCTATCATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTGGAATCTGGCAGTGTTTGTGAGGGGGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTAAAAGTTATTGCTATATTTGTTGATGAAGATCGAGTTAAGCGTGCTGGACCGGGTGAAAATTTAAGGATTAGATTATCTGGTGTTGAAGAAGATGATGTATCATCTGGGTTTATCCTGTCTAGTGTAGCAAAACCAATACCATCTGTTACTGAGTTTGTTGCTCAGCTGGTGATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGATACAAGGCTGTTCTGCACATTCACTCTGTAGTTGAAGAATGTGAGATTGTTGAGCTCCTACAGCAAATTGATCCAAAAACGAAGAGACCCATGAAAAAAAAAATTCTATTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGTGTTCAGGTTAATAATTCCATATGCATTGAGAAATTCTCTGATTTTCCACAACTTGGAAGGTTCACTCTTCGTACTGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA | 1656 | 0.4173 | MLVKMEGSVTKCRFQNKNIPSFVTCSAVSHSSCVLAKILVHLQNFGGLPPWEDIRSLQLETADIAEDNNGVVNPEDAKPEESENYDKMDEDPKQEVQAQPVRAEPKDKEVPSVEEEEDAVEENKKKHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADTGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDDPTVNWSKERYDEIESKMVPFLKQSGYNVKKDVLFLPISGLIGTNLKTRVDKSICPWWNGPCLFEALDAVEVPPRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVCEGDSLLVMPNKDQVKVIAIFVDEDRVKRAGPGENLRIRLSGVEEDDVSSGFILSSVAKPIPSVTEFVAQLVILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKRPMKKKILFVKNGAVVVCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGF | 551 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi13g1868 | 551 | Gene3D | - | 106 | 349 | IPR027417 | - | |
Glsi13g1868 | 551 | MobiDBLite | consensus disorder prediction | 73 | 121 | - | - | |
Glsi13g1868 | 551 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 445 | 550 | IPR009001 | - | |
Glsi13g1868 | 551 | CDD | eRF3_II | 356 | 437 | - | - | |
Glsi13g1868 | 551 | FunFam | Eukaryotic peptide chain release factor GTP-binding subunit ERF3A | 353 | 439 | - | - | |
Glsi13g1868 | 551 | Gene3D | Translation factors | 444 | 551 | - | - | |
Glsi13g1868 | 551 | Pfam | Elongation factor Tu C-terminal domain | 442 | 549 | IPR004160 | - | |
Glsi13g1868 | 551 | PRINTS | GTP-binding elongation factor signature | 224 | 235 | IPR000795 | GO:0003924|GO:0005525 | |
Glsi13g1868 | 551 | PRINTS | GTP-binding elongation factor signature | 268 | 277 | IPR000795 | GO:0003924|GO:0005525 | |
Glsi13g1868 | 551 | PRINTS | GTP-binding elongation factor signature | 208 | 218 | IPR000795 | GO:0003924|GO:0005525 | |
Glsi13g1868 | 551 | PRINTS | GTP-binding elongation factor signature | 129 | 142 | IPR000795 | GO:0003924|GO:0005525 | |
Glsi13g1868 | 551 | Pfam | Elongation factor Tu GTP binding domain | 125 | 328 | IPR000795 | GO:0003924|GO:0005525 | |
Glsi13g1868 | 551 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 116 | 360 | IPR027417 | - | |
Glsi13g1868 | 551 | CDD | EF1_alpha | 129 | 350 | - | - | |
Glsi13g1868 | 551 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 125 | 351 | IPR000795 | GO:0003924|GO:0005525 | |
Glsi13g1868 | 551 | MobiDBLite | consensus disorder prediction | 65 | 121 | - | - | |
Glsi13g1868 | 551 | FunFam | Eukaryotic peptide chain release factor GTP-binding subunit ERF3A | 105 | 349 | - | - | |
Glsi13g1868 | 551 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 181 | 196 | IPR031157 | - | |
Glsi13g1868 | 551 | CDD | eRF3_C_III | 443 | 549 | - | - | |
Glsi13g1868 | 551 | Gene3D | Translation factors | 354 | 439 | - | - | |
Glsi13g1868 | 551 | SUPERFAMILY | Translation proteins | 348 | 441 | IPR009000 | - | |
Glsi13g1868 | 551 | PANTHER | TRANSLATION FACTOR | 117 | 549 | - | - | |
Glsi13g1868 | 551 | FunFam | Putative translation elongation/initiation factor family protein | 443 | 551 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi13g1868 | Glsi-ChrGlsi13 | 34421531 | 34443310 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi13g1868 | 63 | 549 | Eukaryotic Initiation Factors Gene Family | AT5G10630 | 35.020 | 3.27e-93 | 297 |