Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1850 ATGGACAGTATATTAGACAAGGAAAAAGGTTATAATGATGGCAGTGAGGTCAATATGGCCGATCACTCATTCAATGGAAGGAAACTTAGGCCTCTCATTCCAAGGCCTGTGACTTCTTCTAACAATACTTCAACTGCAGCAACTCCTTGCTTAAGCACCGATTTTTTTTCACAATATCACAATCTGGCATCAATGGCAGAGCAGAGTAAGAGAGAGTTCAATACTCCACCAGTTGTGGTCAGCTCAAGGTGGAATCCTACCCCAGAGCAGCTAAGAGCCCTGGAAGAATTGTATCGACGAGGGACAAGAACGCCTTCTGCGGAGGAAATTCAGCATATTACTGCACAGCTTCGAAGATTTGGTAAGATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAGAAACGCCGCCGTCAGATAGAATCAGCTGCTGACGGTCGGCCCCGTGATTTTGATAGTCCAGAGAAGGAAGGCTTAGGCGCAAATAGGACAGTGTTTGAAGTTGAAGAGACCAAGAACTGGGCACCCACTATAAACTGCAGTACAGTGGGAGAGGAATCTGTGTCAATACAAAGGGCAGCAACAGCAGCGATTGCAGCGTGTAGAGCAGATGGATGGATCCAACTCGATGAGGGGGAATTACAACAAAGAAGAAACTTAATGGAAAGGAATGCCACGTGGCGTATGATGCAGCTATCTTGTCCTCCGCCTGCAGCTTTCCCCCACCTAGTAAACACCCCTCCTACAACCTTTACAACTACAATCACAGCAGCAGCTAGAGCAATTGACCCGAAGCTCATTAAGAAACATGATCTCAACTTCACTGTATCACCTCGCAGAGAAAACGCTGTTTTCCACTTGAACTGTAACAATGAGGAAAATGACAGCTGTGGAGAAGCCCAAACCCTTCAACTTTTCCCACTAAGGAGCGGGGAGGACAGTGATAACCTCAACCGAAAAGAGAGAGAGTCAGTTTCAGCAATGAATGCCAACTTCAACCAGAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTAA 1059 0.457 MDSILDKEKGYNDGSEVNMADHSFNGRKLRPLIPRPVTSSNNTSTAATPCLSTDFFSQYHNLASMAEQSKREFNTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQIESAADGRPRDFDSPEKEGLGANRTVFEVEETKNWAPTINCSTVGEESVSIQRAATAAIAACRADGWIQLDEGELQQRRNLMERNATWRMMQLSCPPPAAFPHLVNTPPTTFTTTITAAARAIDPKLIKKHDLNFTVSPRRENAVFHLNCNNEENDSCGEAQTLQLFPLRSGEDSDNLNRKERESVSAMNANFNQSQFFEFLPLKN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1850 352 SUPERFAMILY Homeodomain-like 82 146 IPR009057 -
Glsi13g1850 352 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Glsi13g1850 352 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 346 IPR044555 GO:0003700|GO:0099402
Glsi13g1850 352 MobiDBLite consensus disorder prediction 1 15 - -
Glsi13g1850 352 FunFam WUSCHEL-related homeobox 4 81 148 - -
Glsi13g1850 352 Gene3D - 79 141 - -
Glsi13g1850 352 CDD homeodomain 83 143 IPR001356 GO:0003677
Glsi13g1850 352 MobiDBLite consensus disorder prediction 1 45 - -
Glsi13g1850 352 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Glsi13g1850 352 SMART HOX_1 79 146 IPR001356 GO:0003677
Glsi13g1850 352 MobiDBLite consensus disorder prediction 141 167 - -
Glsi13g1850 352 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1850 Glsi-ChrGlsi13 34294348 34297132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1850 10 352 Wox Gene Family AT3G18010 39.231 5.83e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi13g1850 Homeodomain 1.1e-19 CL0123