Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1842 ATGGTAGTAATGCCAACACACTATGATAGATTCTCAATGGATTTTGTAATGGGAGGAGTGGCAGCTATTATATCAAAGAGTGCAGCTGCACCTATCGAGAGAGTTAAGCTTTTATTACAAAACCAAGGGGAAATGATAAAGAGAGGACAACTCAAGAGACCATATCTGGGTGTATCTAATTGCTTTAAGAGGGTATTGAGGGAGGAGGGTCTGTTTGCCTTTTGGAGAGGTAACCAGGCCAATGTTATACGATATTTCCCAACACAAGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGTGCTGCAGGAGCGATTACTTCGCTACTTCTGTATCATTTAGATTATGCACGGACACGATTGGGCACTGATGCATTGGAGTGCCCTACAAGTGGTCAGCGCCAGTTTAAAGGGCTGGTTGATGTATATCGTAAAACCTTATCAAGTGATGGAATTGGTGGCCTGTACAGGGGATTCGGGGTATCAATAATGGGAATCACCATGTATCGAGGCATGTACTTTGGGATCTATGACACCATGAAACCTGTTGTTTTAGTTGGGCCTTTTGAGGGTAGTTTTCTTGCCAGTTTCTTGTTGGGTTGGAGCATCACGTCTTCCGCTGGGGTTTGTGCCTACCCTTTTGACACACTACGACGGAGAATGATGCTAACATCTGGACAGCCAAATAAGTATCGTAATACGATGCATGCTTTTCATGAGATTGTTAAGCACGAGGGTTTCCTAGCTCTATTTCGAGGAGTCACTGCAAATATACTTCTTGGTGCGGCTGGAGCTGGGGTGCTGGCAGGATATGATCAGCTGCACCGAATCTCATCCAGACACAGTCCCTATTATGAGACAAAACAGAGAGTTTCGAGGTGA 951 0.4427 MVVMPTHYDRFSMDFVMGGVAAIISKSAAAPIERVKLLLQNQGEMIKRGQLKRPYLGVSNCFKRVLREEGLFAFWRGNQANVIRYFPTQAFNFAFKGYFKSIFGHSKERDGYIKWFAGNVASGSAAGAITSLLLYHLDYARTRLGTDALECPTSGQRQFKGLVDVYRKTLSSDGIGGLYRGFGVSIMGITMYRGMYFGIYDTMKPVVLVGPFEGSFLASFLLGWSITSSAGVCAYPFDTLRRRMMLTSGQPNKYRNTMHAFHEIVKHEGFLALFRGVTANILLGAAGAGVLAGYDQLHRISSRHSPYYETKQRVSR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1842 316 Pfam Mitochondrial carrier protein 215 301 IPR018108 -
Glsi13g1842 316 Pfam Mitochondrial carrier protein 12 105 IPR018108 -
Glsi13g1842 316 Pfam Mitochondrial carrier protein 115 206 IPR018108 -
Glsi13g1842 316 SUPERFAMILY Mitochondrial carrier 10 297 IPR023395 -
Glsi13g1842 316 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 10 304 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi13g1842 316 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Glsi13g1842 316 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Glsi13g1842 316 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Glsi13g1842 316 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Glsi13g1842 316 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Glsi13g1842 316 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Glsi13g1842 316 FunFam ADP,ATP carrier protein ER-ANT1 12 306 - -
Glsi13g1842 316 PRINTS Adenine nucleotide translocator signature 55 76 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi13g1842 316 PRINTS Adenine nucleotide translocator signature 114 127 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi13g1842 316 PRINTS Adenine nucleotide translocator signature 88 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi13g1842 316 PRINTS Adenine nucleotide translocator signature 219 235 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi13g1842 316 PRINTS Adenine nucleotide translocator signature 11 23 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi13g1842 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 102 IPR018108 -
Glsi13g1842 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 300 IPR018108 -
Glsi13g1842 316 Gene3D Mitochondrial carrier domain 12 305 IPR023395 -
Glsi13g1842 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 206 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1842 Glsi-ChrGlsi13 34219247 34221110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1842 9 304 Antiporters AT5G17400 80.405 1.90e-175 486