Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1813 ATGGGTGGCCAGATGCAGCAGAGCAATGCTGCGGCGACTGCTCTGTATGACCACGCCGGCAGTGGGTCTTTGCACAATGCAGGGCCTGCCGGTGATGCCGGTGACGCGGTCATGGCCCGGTGGTTGCAGTCCGCCGGCCTGCAGCATCTAGCCTCTCCATTGGCTTCCACTGGTATCGATCATCGCCTCCTTCCGAACCTTCTTATGCAGGGTTATGGGGCACAGTCTGCTGAAGAAAAGCAGAGGCTCTTTAAGTTAATGAGAAACCTCAATTTTAGTGGGGAATCTGGTTCAGAACCATATACACCCTCTGCTCAAACTTTAGGTGGAGTGGCTGCATCAGATGGCTTTTATTCTCCCGAGTTCAGGGGGGACTTTGGAGCTGGGCTCTTGGATCTTCATGCGATGGATGATACAGAGCTTTTGTCTGAGCATGTTATTTCAGAACCTTTTGAGCCATCACCCTTCATGCCTGGAGGTGCTAGAGTGTTTGAAGATGGGTTTAATCCAATAAACAGCAAGCAGGAAAGAGGAGAAGCTGATGTAGATGCATCAATTTCGTTACCAATGAATGAAAAGGAGAATAATACAAGGGAAAATAATGTCGCTAAAATTAGAGTTGTGGTACGCAAAAGGCCTTTAAACAAGAAAGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGCATACGACAATGCATATTTGACTGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTAGAGAAGCATGAGTTTTGTTTTGATGCTGTTCTTGATGAGCATGTTTCAAATGACGAGGTATACCGAGTAACAGTAGAGCCAATTATTCCCACAATTTTTCAGCGAACCAAAGCTACATGTTTTGCTTATGGTCAGACAGGAAGTGGTAAAACCTACACAATGCAACCTTTGCCTCTCAGAGCTGCAGAAGACCTTGTTAGACTGTTGCATCAGCCAGTTTACCAAAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTCTTTGATCTTCTTAGTGACAGAAAAAAACTTTGCATGAGAGAAGATGGACGACAACAAGTTTGCATTGTAGGGCTACAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAAAGGGAATGCCGCCAGAAGTACAGGATCCACTGGTGCAAATGAGGAGTCATCCAGGTCACATGCAATTTTACAGCTGGCTGTGAAGAAGCACAGTGAGGTGAAAGAGAGCAAGCGAAACAATGATGGAAATGAAGCAAAAAGTGGGAAGGTTGTGGGGAAAATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACCACTGACAATGACCGTCAGACCCGGATTGAAGGGGCAGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTCTGGATAATGACCAGATTCATATTCCATTTCGTGGAAGCAAACTCACTGAAGTGCTTCGTGACTCCTTTGTTGGCAATTCAAAGACTGTTATGATATCTTGTATATCTCCAAATGCTGGGTCTTGTGAACACACACTTAATACCTTAAGATATGCAGATCGGGTTAAAAGTCTATCAAAAAGTGGAAATCCTAGAAAGGATCAGGCCCCTAATCCAGTATTGCAAACTAATAAAGAGGTTTCATCTACGATATCTTTTCCAGCTGGTGCAGAGGACATTAATGATCAGCATCAGGAGGTGAGAACAATGGATATAGGCAGAAGATTGGTGGAAAAGGAAAATTCTTTGTACAGCTCTGCTGCTGATGTTGACAAACAGCTATCTAGTTTTTCCTCGAGTTACCTATTCAATGGAAGAGAGGAAAAAGGCTTGGCTTCTGCCTCAATGGAGAGGGAGAGGTTTGAAGTGAAGAATTCTTACACTGATTCTACCAGTCAAAAGATAAACTCTTATTCCCAAAACACAGTTGATACAGATGAGAAAGTTCCAAAAGTGTCTCCTCCTCGCAGGAAAGTTTCTAAAGATGAGAAGACTGAAAGATCTGCAAACTGGCTGAAAAGGGATGCTAACGGGTCTGATCTCTCCACAACAAGCTCCAAGCAGCAGAGCACAGGGAATTATAATGCAAGTACCATTGGATCCAGGCAATCTGAAATGGAATTCTCTCCTGACGGGAATATCAGTGCAATACTTGAGGAGGAAGAAGCACTGATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCAGAAGTGGACCAACCAGGAAGCCTTATAGACAACTACGTAACCCAGTTGAGCTTTGTGCTTTCTCGCAAAGCCGCTGGTCTCGTTAGTCTTCAAGCTCGCCTTGCAAGATTCCAACATCGACTCAAAGAACAGGAGATACTGAGTAGAAAAAGAGTACCTCGTTAA 2445 0.4344 MGGQMQQSNAAATALYDHAGSGSLHNAGPAGDAGDAVMARWLQSAGLQHLASPLASTGIDHRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFSGESGSEPYTPSAQTLGGVAASDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGARVFEDGFNPINSKQERGEADVDASISLPMNEKENNTRENNVAKIRVVVRKRPLNKKELAKKEDDIVTAYDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVSNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRLLHQPVYQNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLAVKKHSEVKESKRNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVLQTNKEVSSTISFPAGAEDINDQHQEVRTMDIGRRLVEKENSLYSSAADVDKQLSSFSSSYLFNGREEKGLASASMERERFEVKNSYTDSTSQKINSYSQNTVDTDEKVPKVSPPRRKVSKDEKTERSANWLKRDANGSDLSTTSSKQQSTGNYNASTIGSRQSEMEFSPDGNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAAGLVSLQARLARFQHRLKEQEILSRKRVPR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1813 814 MobiDBLite consensus disorder prediction 538 558 - -
Glsi13g1813 814 MobiDBLite consensus disorder prediction 688 721 - -
Glsi13g1813 814 Coils Coil 731 762 - -
Glsi13g1813 814 ProSiteProfiles Kinesin motor domain profile. 204 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi13g1813 814 Pfam Kinesin motor domain 210 537 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi13g1813 814 MobiDBLite consensus disorder prediction 639 660 - -
Glsi13g1813 814 PANTHER KINESIN-RELATED PROTEIN 6 31 812 IPR027640 GO:0003777|GO:0007018
Glsi13g1813 814 MobiDBLite consensus disorder prediction 637 721 - -
Glsi13g1813 814 Gene3D Kinesin motor domain 182 541 IPR036961 -
Glsi13g1813 814 CDD KISc_KIF2_like 204 536 - -
Glsi13g1813 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 538 IPR027417 -
Glsi13g1813 814 SMART kinesin_4 202 544 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi13g1813 814 MobiDBLite consensus disorder prediction 542 558 - -
Glsi13g1813 814 ProSitePatterns Kinesin motor domain signature. 437 448 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi13g1813 814 Coils Coil 787 807 - -
Glsi13g1813 814 MobiDBLite consensus disorder prediction 662 686 - -
Glsi13g1813 814 FunFam Kinesin-like protein 183 541 - -
Glsi13g1813 814 PRINTS Kinesin heavy chain signature 285 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi13g1813 814 PRINTS Kinesin heavy chain signature 438 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi13g1813 814 PRINTS Kinesin heavy chain signature 395 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi13g1813 814 PRINTS Kinesin heavy chain signature 488 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1813 Glsi-ChrGlsi13 34008486 34016459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1813 196 561 Calmodulin-binding Proteins AT5G65930 33.862 5.16e-43 167