Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1810 ATGCGCATGGACCTTCAGCACCCTAAAGCTCGATCTTATGCACCGCAAATGAAGATGGCGATTCCCTCCTCCCAGCACTCCGACAACGATCGGAGCAGTTCCGAATTGCGTGCTCTCGATTGTAACCTTACTTCTCTTTGCGACCATATTCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATCGTGCTCCACGCAATGGGTTCTACTTATCGCCTCCATCGCCTTATCCTCTCTCGGAGTTCCTACTTCAGGAATATGCTTCATGGCCCTTGGAAAGAAGCCAGTGCTCCTATGCTGACCTTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCATATTTATATGGGCACCACCCTAAACTTACTGATGATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGACTTATGTGCAATATGTACAGACTTCATCATATCTGAGCTGTGGACTTCAAACTTCTTAGCTTATCAGGTATTTGCGGAGAATCAAGACTATGGCATTCATGGGGAGCGTGTTAGAAATGCTTGTTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAGTTGAAAGAGGTGCTTCCTAAACTTTCACCTCAAACGTTACATGCATTACTGACCTCTGATGAACTGTGGATACCCAGTGAAGAGAAACGGTTTGAATTGGCATTGCACACATTCCAGGCAAAGAATACTCACTGGAAGGCTGAGCATCCTGAGCAAGGAAATTCTGACTCTGAGTCTGGAACTGATATTCGTTCTGATTCTGATAACTCTAAGGGAAAAAGCATAGCTGATAGCTGCATAAATAAGAGGTTGGAAACTGATCTAGGGCCATTAAATCTTAAAAGTGATCTAAAGGACACTAGCACACATAAGCTGCTAGTTGAGCTTGCAGACTGTGTGGCAGAATTCAATAATGGGGATTCTAATTCCACTCAACACTCACAACAAGCTTCACATACCGGTTCATCAAACTTGGAGCCTAGATATTCTTGCAACATGGAAGGGCCTTCATCAATCAGTAATTTGTTGTCAGAAACAGATGGGATTAGAACATCGTGTTCTTATGTTGAGATGCCTCTTGGTGCTGGAGCAACTGGAATGGGAGCCACAGGAGTGGCTATTGAAGGGCCATCTGAGGAAGGGTCTTGCTACCATTTGGATAACAATAGTTGGTTAGTTAGGGATCAATCAAGGCATTGCTTTTCATCAAATTCTTCTTGTAATGGGCTCACATCCAGTGACTGGGGAAGGTATGGTGCGCCTCTTTTTTCATGGGGTGGCCGGGTTGTTGGTAGAAGACAGCTTAATGCTCACTCCAAAGGGAAGTATGGAGTTCATGGGGATGAACACGAAGCATTTGTAAATGTATTTGAAGGAGGTTCTCTATTATATTGCAATATGTCTTTTGAGGCACTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGCTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTAAGTCAGAGGGTGCAAGAAATCGCCGCTGATACATGCAAAGTTTGTTGTCTTATGAGTGTGGCATGCAATTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTACTACCCCTGGTTATTACACGCATGAACATAACCAGAATAATATTTCTGGGAATGTGGGAAGCATATATGTTGCTGAATCTTCTCAAGGTGAAGGAAGTGGCCTGTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCTGGTATTGGTCGTGGAACTACATTTGTGCCAGCAGCTGCTTCTCCTCCTACACGTTTTGTCTTTTCTCGCGTACCATTTGGTGTTGGAAACAGAAACTACCCACAATCTGGAGCTAATGATGATTCAGAGACACAAGCTGACCACAACGGGGACCTGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTTAGCCAGGGGGGAAGTAATGGAACTAATGCACATGGAGAGATAACACAAAGGGGATATGAGATGGGCTTGCAAAGCAGAATGTCTGGAAGTACTGCTGGAGGTCCAAGCACTGGTGGCATTCCCATGCAAATGTTAGAGGCACCGGAACATACCATAGGAATAGAATGGGATAATAGTAACAGTTCTTCTATATCATTGGATTTGAAGACACCTTTAAGCCATTTTCCTCCTTTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGCCAGGTCAAGCATTCTGCAGAAGTGTTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGACGAAGATCCCCAGGGACGGAGAACTCTTGGGTTGTTTCTTCACCGTCGGAAAGCAGAGATTGCTGATTTACACAGAAAGGTGCATATGTATGTCGATTCCCGAGAGAAGGTGACAGCGCGCTATCAGTTGATTTGCCCATCAAAGAGGGAAGTGATGGTGTTTGGAAGTTTTAAACAAACAGGGACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTACTATTTGACGAGCTTGCCGATCTTCTCCAAAACGGGGCCCTAAGGATTATTGCTGTAGTCCAGCTTGTTTAA 2634 0.448 MRMDLQHPKARSYAPQMKMAIPSSQHSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDIVLHAMGSTYRLHRLILSRSSYFRNMLHGPWKEASAPMLTLHVDDKNVNDEAIAMALAYLYGHHPKLTDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSPQTLHALLTSDELWIPSEEKRFELALHTFQAKNTHWKAEHPEQGNSDSESGTDIRSDSDNSKGKSIADSCINKRLETDLGPLNLKSDLKDTSTHKLLVELADCVAEFNNGDSNSTQHSQQASHTGSSNLEPRYSCNMEGPSSISNLLSETDGIRTSCSYVEMPLGAGATGMGATGVAIEGPSEEGSCYHLDNNSWLVRDQSRHCFSSNSSCNGLTSSDWGRYGAPLFSWGGRVVGRRQLNAHSKGKYGVHGDEHEAFVNVFEGGSLLYCNMSFEALLNVRKQLEELAFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCCLMSVACNCRQPFAFSQGVTTPGYYTHEHNQNNISGNVGSIYVAESSQGEGSGLFRPVRVHVRGAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYPQSGANDDSETQADHNGDLSGDGLTALVGLSQGGSNGTNAHGEITQRGYEMGLQSRMSGSTAGGPSTGGIPMQMLEAPEHTIGIEWDNSNSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSAEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEIADLHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1810 877 MobiDBLite consensus disorder prediction 628 649 - -
Glsi13g1810 877 Pfam BTB/POZ domain 55 159 IPR000210 GO:0005515
Glsi13g1810 877 Gene3D Potassium Channel Kv1.1; Chain A 28 194 IPR011333 -
Glsi13g1810 877 SUPERFAMILY POZ domain 55 159 IPR011333 -
Glsi13g1810 877 MobiDBLite consensus disorder prediction 244 274 - -
Glsi13g1810 877 MobiDBLite consensus disorder prediction 1 33 - -
Glsi13g1810 877 MobiDBLite consensus disorder prediction 320 344 - -
Glsi13g1810 877 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 15 877 - -
Glsi13g1810 877 MobiDBLite consensus disorder prediction 244 271 - -
Glsi13g1810 877 ProSiteProfiles BTB domain profile. 61 131 IPR000210 GO:0005515
Glsi13g1810 877 SMART BTB_4 61 161 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Glsi13g1810 BTB 2e-14 CL0033