Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1806 ATGGAGGATTCAGTGGGGGAAAAGCAGAAGCAACGAGAGTTTGCATTAACGTCAGTTGCTGAGCTCTATTCAGTTGCTTCTGCATCGCCGGGGATTGCTCGCTTCAGTTGCGACGGTTCCGTGGCCCTGCTGCAAATTTACCACGAATCTCAGCAGATTGCTCTCAGTGTTGATCTTCGGATTGCTCAGCTATTCAAGTTAGGTCCTGTTCAATCGGTTTGCATCGTGGAAGGGTCTGAAGGGTGTAAAGAGACATCATTTTCCAGGGCAGTCACTGTCCAGTTTAAAAATGAGGAGGAGAGTGGGGCCTTCCATTGTGAATTCCAGCAATGGAAGAAGGAAGCCAATATTAAAGGACAAAACATACCAAATGGAATTGTTTCAACTTCTAAAACCAAATTTGATGAAAAGATAGAGGCATCATCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTTCTGTTATTGAGAACCGTGCTGATTTCATGGGTCGTGTAGTAGTGGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGGGCAAAACATGTTTATGCTGTGGAGGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCATTACTGGGTCAACGAATAACCGTAATTAAAGGCAAAATTGAGGATGTTGAATTGCCTGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCATACGTCATTGCCAGAGATAGGTTTCTCACCCCTAATGGCAGAATGTTTCCTGCAGTGGGAAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTCTTTTGGCAGCAACAAAACTATTATGGTGTAGATTTGACAGCCTTATATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAACAGCTCCTCCAATGTTCCATGTGATAGACTTTACCAAAATAGAGGAAGACGAGCTGTATGAAGTAGACATTCCTTTGAGATTCATAGCCTCTGTGGGTGCCAGAATACATGGTTTGGCCTGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCCCCCGGGTCACCAACAACCCACTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAGTTACTGGTAGGCTGCGTATGATTGCCCACAATGCACAGAGTTATACATTATATTTAACATTGTCAGCTAAAATGTGGGGAATTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTACAGAATGTCCCAACCGCAAGCATATCCATTATCCCAAGATCAGCAACAACAATCACTTCTAGACACACAGGACATACATATCCAGTCTCAGGATTTAGATGAACTTGAGATAATGCAACAGCCTTCGCCTAGTTCATGTGCTCAGATTGATTCTCTAATGCAGAATCTTTAA 1617 0.4286 MEDSVGEKQKQREFALTSVAELYSVASASPGIARFSCDGSVALLQIYHESQQIALSVDLRIAQLFKLGPVQSVCIVEGSEGCKETSFSRAVTVQFKNEEESGAFHCEFQQWKKEANIKGQNIPNGIVSTSKTKFDEKIEASSAKMYFHYYGQLLHQQNMLQDYVRTGTYYASVIENRADFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPLLGQRITVIKGKIEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGRMFPAVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTALYGTAFQGYFSQPVVDAFDPRLLTAPPMFHVIDFTKIEEDELYEVDIPLRFIASVGARIHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEVTGRLRMIAHNAQSYTLYLTLSAKMWGIGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLSQDQQQQSLLDTQDIHIQSQDLDELEIMQQPSPSSCAQIDSLMQNL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1806 538 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 103 468 IPR025799 GO:0016274|GO:0018216
Glsi13g1806 538 FunFam Probable histone-arginine methyltransferase CARM1 288 496 - -
Glsi13g1806 538 Gene3D - 288 496 - -
Glsi13g1806 538 CDD AdoMet_MTases 185 285 - -
Glsi13g1806 538 FunFam Probable histone-arginine methyltransferase CARM1 126 286 - -
Glsi13g1806 538 Gene3D Vaccinia Virus protein VP39 126 286 IPR029063 -
Glsi13g1806 538 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 139 454 IPR025799 GO:0016274|GO:0018216
Glsi13g1806 538 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 460 IPR029063 -
Glsi13g1806 538 Pfam Ribosomal protein L11 methyltransferase (PrmA) 182 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1806 Glsi-ChrGlsi13 33968317 33974885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1806 146 438 C2H2 Transcription Factor Family AT3G12270 32.797 8.54e-39 148