Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1801 ATGCTTAACCCTGAAGGAGAACTAAAAATAAGTTTTGGCTATCAATGCAATGGCAAAAGAAGTATCCCTTGTGAGGTTGCCAATGGCTACAAAATCCTACCCGAAGTCCGCAGAAATAGTAGTTTTTCATGCTTTTCTGGTGCAGCCTTGAGTGCAAATGCTACATTAGCCAACACAAACATTTGCAATGGTGTGATAGGAGAAGAAATACTTCCAAGTTGGGACTCCCCTAATTCATTTCGTAAGGTACCCTCTTCACCAAGTCTTTCAAGGTTAGATATATTATCATCTTCTCTCCAGAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGCGATATGCTTGAATATGACTCTTGTACATTAAAAGCCATGAGTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATTCTATGGAAGTACAAGTAGCAGGAGGAGCCGCTGGGGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGATGGCTCTTTTGTGCAGTTTATGATGGCTTTAATGGGAGAGATGCTGCAGACTTTCTGGCTGGTACCTTGTATGACACCATCATATCTAATTTTAATATGTTATATTGGGAATTTGAACCAGATTCCATCAAAACTTCTGATGAGGTGGGTTTGGATGGATCCTTCCCATACAAGTTGGATGACAGTCTTATTATTAATGAGGAGCAATCTCTGTCAGAACATAGGGGGAACAACTATTCTTATCTTGGCTGTTTCGCAAAGAGTAATATATCTGCTAAGGTAGGAGCATCATTTAAGTCATTTTCAGATGGAGTAGTTGATAGCCTCCAGCGCGCTCTTAGCCAGGTTGAGAACGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGCCCAGATTTAGTCTCTGTTGGATCTTGTGTTTTACTAGTGCTTCTTCATGGGAGTGATTTGTATACGCTTAATTTAGGTGACAGTAGAGCCGTTCTTGCAACATGTCATAGTAATACAAGAGACAGAATGAATGGGAATGACAAACTCAAAGCTATCCAGCTTACAGAAAGTCATACTGTTGAAAATGAAGCTGAAAGAGCTCGACTTCTGGCTGATCATCCTGATGATCCCAAGGCCATTGTAGCAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTAGGAGTAGGTTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGAGTACGTGATCTTAGAAGCCCTCCATATATCTCGACTCAGCCATCACTGAATGTGCACAGGATCTCAAATTCTGATCAATTTGTGATAGTTGGGAGTGATGGATTATTTGACTTCTTCAGCAATAATGAGGCAGTGGAGCTTGTTGAGGCTTATATCTTGAGCAATCCAGATGGTGATCCAGCTAAGTTTCTGATCGAGCAGCTTGTAGCAAGAGCAGCCGATTCTGCAGGTTTCAGCATGGAAGAGTTAATGAGTATTCCAGCGGGAAGGAGGAGGAAGTACCATGATGACGTTACCGTAATTGTGATCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAACTTGCATCTGA 1581 0.413 MLNPEGELKISFGYQCNGKRSIPCEVANGYKILPEVRRNSSFSCFSGAALSANATLANTNICNGVIGEEILPSWDSPNSFRKVPSSPSLSRLDILSSSLQSNLSNLSCSPSTPSDMLEYDSCTLKAMSAPSRSEGFLNSMEVQVAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTLYDTIISNFNMLYWEFEPDSIKTSDEVGLDGSFPYKLDDSLIINEEQSLSEHRGNNYSYLGCFAKSNISAKVGASFKSFSDGVVDSLQRALSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGSDLYTLNLGDSRAVLATCHSNTRDRMNGNDKLKAIQLTESHTVENEAERARLLADHPDDPKAIVAGKVKGKLKVTRALGVGYLKKKSLNDALMGILRVRDLRSPPYISTQPSLNVHRISNSDQFVIVGSDGLFDFFSNNEAVELVEAYILSNPDGDPAKFLIEQLVARAADSAGFSMEELMSIPAGRRRKYHDDVTVIVIILGMNHRTSKASTCI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1801 526 SMART PP2C_4 127 511 IPR001932 -
Glsi13g1801 526 FunFam Probable protein phosphatase 2C 40 117 522 - -
Glsi13g1801 526 CDD PP2Cc 149 513 IPR001932 -
Glsi13g1801 526 SUPERFAMILY PP2C-like 150 513 IPR036457 -
Glsi13g1801 526 PANTHER PROTEIN PHOSPHATASE 2C 144 511 IPR015655 GO:0004722|GO:0006470
Glsi13g1801 526 ProSiteProfiles PPM-type phosphatase domain profile. 136 513 IPR001932 -
Glsi13g1801 526 Pfam Protein phosphatase 2C 252 468 IPR001932 -
Glsi13g1801 526 Gene3D - 109 522 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1801 Glsi-ChrGlsi13 33936519 33938422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1801 3 526 PP2C-type Phosphatase Gene Family AT3G16560 61.698 0.0 601