Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1774 ATGGCTACCCATTCTTTACTTTTACCTCGTAAGACCGATGCCATTTCCGACTTCAATTTTCCTATTCCATCTTCCCGTCTTCCCGTCACTGCCCCAACCCCCACTTCTGCTGATTCTTCCTCTTTGAAGCGGAAGAGGCCTCCCAAGATCGAGATCCCAAATGTTTTGCAAGAAATCCAAACAGAGAAGCTCATTGATTTCAAGGCCTCCAAGGAAAATGTTTCTTTTTGTGGATTTGGCTTTGGGGTTTCTTCGGCGAAAGGCAAGAAAAAGTTCATGGAAGATACCCACAAGATTGTTTCTACCTCAGAGGGCAACCCAAAGAAAGGCTTCTTTGGCGTCTACGATGGGCACGGTGGCAAGAAAGCCGCAGAGTTTGTCGCCGAGAACCTGCACACCAACATTTTCAAAATGATGGAGCATTGTAAGGAATCCAAGGCTAAGGAGGAGGCAGTTAAAGCTGGGTATCTTAAGACAGACGGTATAGGCAGCGGTACCTGTTGTGTCACAGCCTTGATCCAAGGGCAGGAGATTGTTGTTTCAAACCTGGGAGATTGCAGGGCTGTTCTTTGTAGAGGTGGAGTGGCTGAAGTTCTCACAAGAGATCACAGAGTGGAACTGGAGGATGAACGGAGAAGAATTGAGGATAAGGGAGGATATGTGGAGGTTCATCGAGGAGTATGGAGAGTTCATGGGATACTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAGGAGTGGGTGCTGGCTGAACCTGATACCAAGATTTTGCAATTGACTGCAGACATGGACTTTCTTGTCTTGGCTTCTGATGGACTGTGGGATGAGGTTGATAACCAAGAAGCTGTTGATACTGTGACACGTTTATGTCGAGGTGAAGAGAAGCTGGGTTCCTCAGGAGATCTACAGAACGATACCGATGATGATTATGGACGCGTGAACATAAGTCCTTCATCAAAGCTTCGGAGAATTTCACTTATCAAGCAGCCAAGGGGCACGGGAAACGATACTGATGATGATTATGGACGCGTGAACATAAGTCCTTCATCAAAGCTTCGGAGAATTTCACTTATCAAGCAGCCAAGGGGCACGGGAGTGTCTACTGGCTATAAAAAGACACTGAATAGCTGGAATGAAGCTGAAGATGACTTTGCTTGTGAAAATGAAAGCCCTCCATCAAAATCACGAAGAATTTCATTTGTCAAGCGAGTAAATATGAAAAAAGAGACGCCAACCAAAGAAAGCAACATCCACAATAAAAGTCCACCTGATGGACTTCTGGCTGCCTGTAAGGAGCTTGTGAACCTTGCTGTGAGAAGGGGAACTTTGGATGACGTCACTCCTATTTCAGAACATAAACTCTTCCGAGTGCGAGCGTATGCATATGGATGGGCCTGTTCTTGGGGGCGTAGAAATCTATCTCAGGGAAACTTTCAGGGAAAGCTTATCCGGCATGGTCTCAGAATCAGCGAGGAGCGTGTTGCAACCACAAAGAATGAAAAGGGTACTTGA 1515 0.4614 MATHSLLLPRKTDAISDFNFPIPSSRLPVTAPTPTSADSSSLKRKRPPKIEIPNVLQEIQTEKLIDFKASKENVSFCGFGFGVSSAKGKKKFMEDTHKIVSTSEGNPKKGFFGVYDGHGGKKAAEFVAENLHTNIFKMMEHCKESKAKEEAVKAGYLKTDGIGSGTCCVTALIQGQEIVVSNLGDCRAVLCRGGVAEVLTRDHRVELEDERRRIEDKGGYVEVHRGVWRVHGILSVSRSIGDAHLKEWVLAEPDTKILQLTADMDFLVLASDGLWDEVDNQEAVDTVTRLCRGEEKLGSSGDLQNDTDDDYGRVNISPSSKLRRISLIKQPRGTGNDTDDDYGRVNISPSSKLRRISLIKQPRGTGVSTGYKKTLNSWNEAEDDFACENESPPSKSRRISFVKRVNMKKETPTKESNIHNKSPPDGLLAACKELVNLAVRRGTLDDVTPISEHKLFRVRAYAYGWACSWGRRNLSQGNFQGKLIRHGLRISEERVATTKNEKGT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1774 504 SUPERFAMILY PP2C-like 71 448 IPR036457 -
Glsi13g1774 504 CDD PP2Cc 79 289 IPR001932 -
Glsi13g1774 504 MobiDBLite consensus disorder prediction 296 346 - -
Glsi13g1774 504 MobiDBLite consensus disorder prediction 310 324 - -
Glsi13g1774 504 Pfam Protein phosphatase 2C 80 289 IPR001932 -
Glsi13g1774 504 ProSiteProfiles PPM-type phosphatase domain profile. 80 454 IPR001932 -
Glsi13g1774 504 ProSitePatterns PPM-type phosphatase domain signature. 111 119 IPR000222 GO:0043169
Glsi13g1774 504 SMART PP2C_4 74 452 IPR001932 -
Glsi13g1774 504 Gene3D - 72 451 IPR036457 -
Glsi13g1774 504 PANTHER PROTEIN PHOSPHATASE 2C 57 438 IPR015655 GO:0004722|GO:0006470
Glsi13g1774 504 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1774 Glsi-ChrGlsi13 33800837 33804971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1774 24 450 PP2C-type Phosphatase Gene Family AT1G67820 48.423 8.70e-122 361