Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi13g1770 | ATGGAGGCAGAGTCGGAGACAGAGAGGAGGTACAAGTATGTGAGATGGAGGAGTGGGTGGGAGAGGGTGGAGTGCTGCGTGTGTCTGTGTGGGTTTGAAGGGAGTGAGGAGGTGACCCAGTTGTCTTGCAACCATTTCTTCCATAAAGCTTGCTTAGACAAGTGGTTTCATTACAAACACACCACCTGCCCTCTCTGTCGTTCCATATATTAG | 213 | 0.5023 | MEAESETERRYKYVRWRSGWERVECCVCLCGFEGSEEVTQLSCNHFFHKACLDKWFHYKHTTCPLCRSIY | 70 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi13g1770 | 70 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 69 | IPR013083 | - | |
Glsi13g1770 | 70 | SUPERFAMILY | RING/U-box | 19 | 70 | - | - | |
Glsi13g1770 | 70 | ProSiteProfiles | Zinc finger RING-type profile. | 25 | 67 | IPR001841 | - | |
Glsi13g1770 | 70 | PANTHER | - | 9 | 69 | IPR044249 | - | |
Glsi13g1770 | 70 | SMART | ringv_2 | 24 | 67 | IPR011016 | GO:0008270 | |
Glsi13g1770 | 70 | SMART | ring_2 | 25 | 66 | IPR001841 | - | |
Glsi13g1770 | 70 | Pfam | Ring finger domain | 24 | 67 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi13g1770 | Glsi-ChrGlsi13 | 33788181 | 33788393 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi13g1770 | 24 | 68 | C3H Transcription Factor Family | AT2G04240 | 55.556 | 2.34e-14 | 61.6 |